RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SLC35G1Q2M3R5 365 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 CCDC144BQ3MJ40 725 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 GJC2Q5T442 439 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-207ENST00000435455 RNF180Q86T96 592 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 HOMER1Q86YM7 354 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 PIGSQ96S52 555 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 KATNBL1Q9H079 304 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 VTA1Q9NP79 307 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 PCDHA1Q9Y5I3 950 aa18.86■□□□□ 0.61
SMPD4-207ENST00000435455 CYTH3O43739 400 aa18.85■□□□□ 0.61
SMPD4-207ENST00000435455 EVI5O60447 810 aa18.85■□□□□ 0.61
SMPD4-207ENST00000435455 APOA5Q6Q788 366 aa18.85■□□□□ 0.61
SMPD4-207ENST00000435455 BLOC1S2Q6QNY1 142 aa18.85■□□□□ 0.61
SMPD4-207ENST00000435455 SAMD3Q8N6K7 520 aa18.85■□□□□ 0.61
SMPD4-207ENST00000435455 JAKMIP1Q96N16 626 aaKnown RBP18.85■□□□□ 0.61
SMPD4-207ENST00000435455 PURBQ96QR8 312 aaKnown RBP18.85■□□□□ 0.61
SMPD4-207ENST00000435455 DNAH12Q6ZR08 3092 aa18.85■□□□□ 0.61
SMPD4-207ENST00000435455 PPP1R11O60927 126 aaPredicted RBP18.84■□□□□ 0.61
SMPD4-207ENST00000435455 PGK1P00558 417 aa18.84■□□□□ 0.61
SMPD4-207ENST00000435455 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
SMPD4-207ENST00000435455 PSMA5P28066 241 aa18.84■□□□□ 0.61
SMPD4-207ENST00000435455 FGD1P98174 961 aa18.84■□□□□ 0.61
SMPD4-207ENST00000435455 FANCBQ8NB91 859 aa18.84■□□□□ 0.61
SMPD4-207ENST00000435455 RRP36Q96EU6 259 aaKnown RBP18.84■□□□□ 0.61
SMPD4-207ENST00000435455 TCEANC2Q96MN5 208 aa18.84■□□□□ 0.61
SMPD4-207ENST00000435455 SENP6Q9GZR1 1112 aaPredicted RBP18.84■□□□□ 0.61
SMPD4-207ENST00000435455 SPC25Q9HBM1 224 aa18.84■□□□□ 0.61
SMPD4-207ENST00000435455 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
SMPD4-207ENST00000435455 GHRHRQ02643 423 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 TNFAIP2Q03169 654 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 PDE4DQ08499 809 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 IQSEC1Q6DN90 963 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 MICU3Q86XE3 530 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 SYTL5Q8TDW5 730 aaPredicted RBP18.83■□□□□ 0.6
SMPD4-207ENST00000435455 TBC1D5Q92609 795 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 LENG1Q96BZ8 264 aaPredicted RBP18.83■□□□□ 0.6
SMPD4-207ENST00000435455 USP26Q9BXU7 913 aa18.83■□□□□ 0.6
SMPD4-207ENST00000435455 MAP3K20Q9NYL2 800 aaKnown RBP18.83■□□□□ 0.6
SMPD4-207ENST00000435455 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.6
SMPD4-207ENST00000435455 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 ADAMTS4O75173 837 aa18.82■□□□□ 0.6
SMPD4-207ENST00000435455 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
SMPD4-207ENST00000435455 CFBP00751 764 aa18.82■□□□□ 0.6
SMPD4-207ENST00000435455 RXRAP19793 462 aa18.82■□□□□ 0.6
SMPD4-207ENST00000435455 EDNRBP24530 442 aa18.82■□□□□ 0.6
SMPD4-207ENST00000435455 HSD17B4P51659 736 aa18.82■□□□□ 0.6
SMPD4-207ENST00000435455 FBXO16Q8IX29 292 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 NSUN6Q8TEA1 469 aaKnown RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 TSEN34Q9BSV6 310 aaKnown RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 UPF3AQ9H1J1 476 aaKnown RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 RBM28Q9NW13 759 aaKnown RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
SMPD4-207ENST00000435455 H0YGN5 161 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 OPLAHO14841 1288 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 ZBTB43O43298 467 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 ADCYAP1R1P41586 468 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 RCAN1P53805 252 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 TAPT1Q6NXT6 567 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 TMTC3Q6ZXV5 915 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
SMPD4-207ENST00000435455 RAB11FIP4Q86YS3 637 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
SMPD4-207ENST00000435455 PIBF1Q8WXW3 757 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 RMDN3Q96TC7 470 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
SMPD4-207ENST00000435455 KLF18A0A0U1RQI7 1052 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 ADCY6O43306 1168 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 C6orf222P0C671 652 aaPredicted RBP18.8■□□□□ 0.6
SMPD4-207ENST00000435455 CPA1P15085 419 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
SMPD4-207ENST00000435455 RPS6KB1P23443 525 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 CST5P28325 142 aaPredicted RBP18.8■□□□□ 0.6
SMPD4-207ENST00000435455 GJA9P57773 515 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 LRRC26Q2I0M4 334 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 Q6ZUG5 572 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 EEPD1Q7L9B9 569 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 C7orf61Q8IZ16 206 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 FBXL16Q8N461 479 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 KLHDC9Q8NEP7 349 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 TAAR1Q96RJ0 339 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 IWS1Q96ST2 819 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 BRPF3Q9ULD4 1205 aa18.8■□□□□ 0.6
SMPD4-207ENST00000435455 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-207ENST00000435455 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
SMPD4-207ENST00000435455 MOXD2PA6NHM9 499 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 GCOM1H8Y6P7 765 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-207ENST00000435455 POLR2MP0CAP2 368 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 PPP2R5BQ15173 497 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 RTN1Q16799 776 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 ARHGEF16Q5VV41 709 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 PCSK9Q8NBP7 692 aaKnown RBP18.79■□□□□ 0.6
SMPD4-207ENST00000435455 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 PDGFCQ9NRA1 345 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 COL20A1Q9P218 1284 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 Q9Y3F1 56 aa18.79■□□□□ 0.6
SMPD4-207ENST00000435455 KIAA1217Q5T5P2 1943 aa18.78■□□□□ 0.6
SMPD4-207ENST00000435455 GOLGA8AA7E2F4 631 aa18.78■□□□□ 0.6
SMPD4-207ENST00000435455 GOLGA8BA8MQT2 603 aa18.78■□□□□ 0.6
SMPD4-207ENST00000435455 ATN1P54259 1190 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-207ENST00000435455 NKX3-2P78367 333 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms