RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 DYMQ7RTS9 669 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 GTF2IRD2Q86UP8 949 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 OR2W6PQ8NHA6 318 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 SCLYQ96I15 445 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 RPS6KC1Q96S38 1066 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 IFT22Q9H7X7 185 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 AASDHPPTQ9NRN7 309 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 PCDHB12Q9Y5F1 795 aa9.45□□□□□ -0.9
PTPRK-212ENST00000434424 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
PTPRK-212ENST00000434424 KRT18P05783 430 aaKnown RBP9.44□□□□□ -0.9
PTPRK-212ENST00000434424 MAP4P27816 1152 aaKnown RBP9.44□□□□□ -0.9
PTPRK-212ENST00000434424 HOXC12P31275 282 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 TMPRSS15P98073 1019 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 HLTFQ14527 1009 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRK-212ENST00000434424 CDCA2Q69YH5 1023 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-212ENST00000434424 ZBTB46Q86UZ6 589 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 SHISA5Q8N114 240 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 PI4K2BQ8TCG2 481 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 BRF1Q92994 677 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 KREMEN1Q96MU8 473 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 CCDC8Q9H0W5 538 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-212ENST00000434424 DIS3Q9Y2L1 958 aaKnown RBP9.44□□□□□ -0.9
PTPRK-212ENST00000434424 NUP160Q12769 1436 aa9.44□□□□□ -0.9
PTPRK-212ENST00000434424 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 ABCA10Q8WWZ4 1543 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 ZEB2O60315 1214 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 SNRPB2P08579 225 aaKnown RBP9.43□□□□□ -0.9
PTPRK-212ENST00000434424 SCNN1BP51168 640 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 ZNF445P59923 1031 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-212ENST00000434424 PIN1Q13526 163 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-212ENST00000434424 UBE4AQ14139 1066 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 SF1Q15637 639 aaKnown RBP9.43□□□□□ -0.9
PTPRK-212ENST00000434424 C14orf80Q86SX3 495 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRK-212ENST00000434424 CHMP4CQ96CF2 233 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 YIPF4Q9BSR8 244 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRK-212ENST00000434424 SPEF1Q9Y4P9 236 aa9.43□□□□□ -0.9
PTPRK-212ENST00000434424 CUX1P39880 1505 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 TCRBV16S1A1N1A0A5B0 115 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 TIAF1O95411 115 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 CPP00450 1065 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 F13BP05160 661 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRK-212ENST00000434424 PPP2R5DQ14738 602 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 NTRK3Q16288 839 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 ARMCX6Q7L4S7 300 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-212ENST00000434424 SMG8Q8ND04 991 aaKnown RBP9.42□□□□□ -0.9
PTPRK-212ENST00000434424 VWCEQ96DN2 955 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 CDH19Q9H159 772 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 NKX2-4Q9H2Z4 354 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 NOL6Q9H6R4 1146 aaKnown RBP9.42□□□□□ -0.9
PTPRK-212ENST00000434424 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 TRHDEQ9UKU6 1024 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 PCOLCE2Q9UKZ9 415 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 APOBEC2Q9Y235 224 aaKnown RBP9.42□□□□□ -0.9
PTPRK-212ENST00000434424 FHOD1Q9Y613 1164 aa9.42□□□□□ -0.9
PTPRK-212ENST00000434424 WRNQ14191 1432 aaPredicted RBP eCLIP9.41□□□□□ -0.9
PTPRK-212ENST00000434424 AQP7O14520 342 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 PYGMP11217 842 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 BPIP17213 487 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 ASPAP45381 313 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 GRB10Q13322 594 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 HDAC1Q13547 482 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-212ENST00000434424 PIK3R6Q5UE93 754 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 NFXL1Q6ZNB6 911 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 ABI1Q8IZP0 508 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 CNTD1Q8N815 330 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 TMEM145Q8NBT3 493 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 DNAJB8Q8NHS0 232 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 SYTL5Q8TDW5 730 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-212ENST00000434424 WNK4Q96J92 1243 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 ERCC6L2Q5T890 1561 aa9.41□□□□□ -0.9
PTPRK-212ENST00000434424 NEMP1O14524 444 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 GAS2O43903 313 aaKnown RBP9.4□□□□□ -0.9
PTPRK-212ENST00000434424 MYL1P05976 194 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 NAT1P18440 290 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 OS9Q13438 667 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-212ENST00000434424 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.9
PTPRK-212ENST00000434424 MSMPQ1L6U9 139 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 NBPF9Q3BBW0 867 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 ZCCHC8Q6NZY4 707 aaKnown RBP9.4□□□□□ -0.9
PTPRK-212ENST00000434424 USP53Q70EK8 1073 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 FIBCD1Q8N539 461 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 C12orf50Q8NA57 414 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-212ENST00000434424 TTC8Q8TAM2 541 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 FBXO41Q8TF61 875 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 CAMKK2Q96RR4 588 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 ASPNQ9BXN1 380 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 TRIM8Q9BZR9 551 aa9.4□□□□□ -0.9
PTPRK-212ENST00000434424 GSX1Q9H4S2 264 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-212ENST00000434424 CYP26B1Q9NR63 512 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms