RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 MAFAQ8NHW3 353 aaPredicted RBP17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 POLR3EQ9NVU0 708 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 CD4P01730 458 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 SDSP20132 328 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 IRX5P78411 483 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 RNF207Q6ZRF8 634 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 RASGRP2Q7LDG7 609 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 DNERQ8NFT8 737 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.45■□□□□ 0.388e-7■■■■■ 32.7
RPUSD3-208ENST00000433972 TTYH1Q9H313 450 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 HIPK3Q9H422 1215 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 GPHNQ9NQX3 736 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 A0A0C4DFX4 3053 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 ASTN1O14525 1302 aa17.45■□□□□ 0.38
RPUSD3-208ENST00000433972 NFIBO00712 420 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 SUPT20HL2P0C7V6 817 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 SNHG28P0DPA3 235 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 CSF2RAP15509 400 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 PDE4DQ08499 809 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 TIFAQ96CG3 184 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 WDR11Q9BZH6 1224 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 PPP1R12CQ9BZL4 782 aa17.44■□□□□ 0.38
RPUSD3-208ENST00000433972 CALML3P27482 149 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 RGS22Q8NE09 1264 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 IL23AQ9NPF7 189 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 PDGFCQ9NRA1 345 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
RPUSD3-208ENST00000433972 KPNA6O60684 536 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 RAB30Q15771 203 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 ERICH6BQ5W0A0 696 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 RPUSD2Q8IZ73 545 aaKnown RBP17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 SCFD2Q8WU76 684 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
RPUSD3-208ENST00000433972 UNC80Q8N2C7 3258 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 RBM47A0AV96 593 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 CYP2C18P33260 490 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 ASPRV1Q53RT3 343 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 RASIP1Q5U651 963 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 CWC27Q6UX04 472 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 SLC30A10Q6XR72 485 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 ZNF365Q70YC5 407 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 CLEC4DQ8WXI8 215 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 HERVK_113Q902F9 699 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 DSCC1Q9BVC3 393 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 ZNF576Q9H609 170 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 CNNM2Q9H8M5 875 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 MSRAQ9UJ68 235 aa17.41■□□□□ 0.38
RPUSD3-208ENST00000433972 FGBP02675 491 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 PFKMP08237 780 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 EDNRBP24530 442 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 MCF2L2Q86YR7 1114 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 GAS2L1Q99501 681 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 MTG1Q9BT17 334 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 KRT23Q9C075 422 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 ABCB11O95342 1321 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 NEDD4P46934 1319 aa17.4■□□□□ 0.38
RPUSD3-208ENST00000433972 CDH23Q9H251 3354 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 LRRC37A2A6NM11 1700 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 B4GALT4O60513 344 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 KDM4AO75164 1064 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 TTLL4Q14679 1199 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 C16orf59Q7L2K0 433 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 ANKS1AQ92625 1134 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 ZSCAN10Q96SZ4 725 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 NOC4LQ9BVI4 516 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-208ENST00000433972 MYL3P08590 195 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 ACRP10323 421 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 PSMC6P62333 389 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 PTPN11Q06124 597 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 CDC37Q16543 378 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 USH1GQ495M9 461 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 SYMPKQ92797 1274 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 ZKSCAN3Q9BRR0 538 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 PBX4Q9BYU1 374 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 TRPV6Q9H1D0 765 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 GRIN2DO15399 1336 aa17.38■□□□□ 0.37
RPUSD3-208ENST00000433972 MCM3APO60318 1980 aa17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 PARP1P09874 1014 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms