RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 KCNH3Q9ULD8 1083 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 IQSEC3Q9UPP2 1182 aaPredicted RBP8.49□□□□□ -1.05
COL17A1-204ENST00000433822 BAZ2AQ9UIF9 1905 aaKnown RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 C10orf71Q711Q0 1435 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 ERCC5P28715 1186 aaPredicted RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 KIF5BP33176 963 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 GPC1P35052 558 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 GYG1P46976 350 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 GNAQP50148 359 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 GSTO1P78417 241 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 CCZ1BP86790 482 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 CCZ1P86791 482 aaPredicted RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 PDE4BQ07343 736 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 IFIT1BQ5T764 474 aaKnown RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 TBC1D9BQ66K14 1250 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 GALNT17Q6IS24 598 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 CTR9Q6PD62 1173 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 OLFM4Q6UX06 510 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 ADGRA1Q86SQ6 560 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 METTL16Q86W50 562 aaKnown RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 STK11IPQ8N1F8 1099 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 ENOX1Q8TC92 643 aaKnown RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 LRRC4BQ9NT99 713 aa8.48□□□□□ -1.05
COL17A1-204ENST00000433822 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
COL17A1-204ENST00000433822 TNRC6CQ9HCJ0 1690 aaKnown RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 TRIM75PA6NK02 468 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 GPR25O00155 361 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 SNAP23O00161 211 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 AP1G2O75843 785 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 LDHCP07864 332 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 SKILP12757 684 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 CALML3P27482 149 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 MARCKSP29966 332 aaPredicted RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 TM4SF1P30408 202 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 KRT2P35908 639 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 MECOMQ03112 1051 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 POSTNQ15063 836 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 PKN1Q16512 942 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 DBN1Q16643 649 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 CCDC144BQ3MJ40 725 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 GLIPR1L2Q4G1C9 344 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 ARL6IP4Q66PJ3 421 aaKnown RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 CCDC144CPQ8IYA2 1237 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 MIGA1Q8NAN2 632 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 ZNF384Q8TF68 577 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 CELF1Q92879 486 aaKnown RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 TRERF1Q96PN7 1200 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 DCP1AQ9NPI6 582 aaPredicted RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 GJB4Q9NTQ9 266 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 ABCF2Q9UG63 623 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
COL17A1-204ENST00000433822 NRBP1Q9UHY1 535 aa8.47□□□□□ -1.05
COL17A1-204ENST00000433822 LRRC37AA6NMS7 1700 aa8.46□□□□□ -1.05
COL17A1-204ENST00000433822 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.05
COL17A1-204ENST00000433822 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 SMC2O95347 1197 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 ZNF18P17022 549 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 RXRAP19793 462 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 SFPQP23246 707 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 HOXA7P31268 230 aaPredicted RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 GUCY1A2P33402 732 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 ATP2C1P98194 919 aaPredicted RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 FANCCQ00597 558 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 LRMPQ12912 555 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 ORC2Q13416 577 aaPredicted RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 GRAPQ13588 217 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 MORC3Q14149 939 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 RRP12Q5JTH9 1297 aaKnown RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 TMC4Q7Z404 712 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 RAB11FIP4Q86YS3 637 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 DAGLBQ8NCG7 672 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 GRAPLQ8TC17 118 aaPredicted RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 SDR42E1Q8WUS8 393 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 ANKRD7Q92527 254 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 KLRG1Q96E93 195 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 GSDMAQ96QA5 445 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 LZTS2Q9BRK4 669 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 MYL10Q9BUA6 226 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 GTPBP4Q9BZE4 634 aaKnown RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 XPO4Q9C0E2 1151 aaKnown RBP8.46□□□□□ -1.06
COL17A1-204ENST00000433822 HSD3B7Q9H2F3 369 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 TMX1Q9H3N1 280 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 ZNF287Q9HBT7 754 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 TOMM22Q9NS69 142 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 DYRK1BQ9Y463 629 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 PCDHA5Q9Y5H7 936 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 TAF1P21675 1872 aa8.46□□□□□ -1.06
COL17A1-204ENST00000433822 NAV1Q8NEY1 1877 aa8.45□□□□□ -1.06
COL17A1-204ENST00000433822 GOLGA6L9A6NEM1 432 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms