RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 EGFRP00533 1210 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 USH1GQ495M9 461 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 FBXO11Q86XK2 927 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 LRRC8AQ8IWT6 810 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 MMTAG2Q9BU76 263 aaKnown RBP22.07■■□□□ 1.12
VRK2-205ENST00000432057 GLT8D2Q9H1C3 349 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 TMX2Q9Y320 296 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 CBFA2T2O43439 604 aa22.06■■□□□ 1.12
VRK2-205ENST00000432057 ZNF18P17022 549 aa22.06■■□□□ 1.12
VRK2-205ENST00000432057 STX17P56962 302 aa22.06■■□□□ 1.12
VRK2-205ENST00000432057 CT47A1Q5JQC4 288 aaPredicted RBP22.06■■□□□ 1.12
VRK2-205ENST00000432057 PPP4R3AQ6IN85 833 aa22.06■■□□□ 1.12
VRK2-205ENST00000432057 SPTLC3Q9NUV7 552 aa22.06■■□□□ 1.12
VRK2-205ENST00000432057 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
VRK2-205ENST00000432057 FXR2P51116 673 aaKnown RBP eCLIP22.05■■□□□ 1.12
VRK2-205ENST00000432057 ANO3Q9BYT9 981 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 GOPCQ9HD26 462 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 SAMSN1Q9NSI8 373 aaKnown RBP22.05■■□□□ 1.12
VRK2-205ENST00000432057 KBTBD4Q9NVX7 518 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 IMPACTQ9P2X3 320 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 DDX25Q9UHL0 483 aaKnown RBP22.05■■□□□ 1.12
VRK2-205ENST00000432057 PRR12Q9ULL5 1215 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 CTNND2Q9UQB3 1225 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 PTGER2P43116 358 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 ZNF280AP59817 542 aaPredicted RBP22.05■■□□□ 1.12
VRK2-205ENST00000432057 TMEM266Q2M3C6 531 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 FAM83BQ5T0W9 1011 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 NAP1L5Q96NT1 182 aaPredicted RBP22.05■■□□□ 1.12
VRK2-205ENST00000432057 RMND1Q9NWS8 449 aa22.05■■□□□ 1.12
VRK2-205ENST00000432057 MEIS2O14770 477 aa22.04■■□□□ 1.12
VRK2-205ENST00000432057 CAP2P40123 477 aa22.04■■□□□ 1.12
VRK2-205ENST00000432057 PRELPP51888 382 aa22.04■■□□□ 1.12
VRK2-205ENST00000432057 ZYXQ15942 572 aaKnown RBP22.04■■□□□ 1.12
VRK2-205ENST00000432057 CUEDC2Q9H467 287 aa22.04■■□□□ 1.12
VRK2-205ENST00000432057 LRWD1Q9UFC0 647 aa22.04■■□□□ 1.12
VRK2-205ENST00000432057 LTBP3Q9NS15 1303 aa22.04■■□□□ 1.12
VRK2-205ENST00000432057 POTEMA6NI47 508 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 STAT2P52630 851 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 GSDMDP57764 484 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 RASA3Q14644 834 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 ZNF658Q5TYW1 1059 aaPredicted RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 P2RX7Q99572 595 aaKnown RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 MAGEF1Q9HAY2 307 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 INTS13Q9NVM9 706 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 GDAQ9Y2T3 454 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 GCFC2P16383 781 aaKnown RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 CDK11BP21127 795 aaKnown RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 RPS12P25398 132 aaKnown RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 GMPSP49915 693 aaPredicted RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 SPATA1Q5VX52 437 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 CCDC84Q86UT8 332 aaPredicted RBP22.03■■□□□ 1.12
VRK2-205ENST00000432057 CALML4Q96GE6 196 aa22.03■■□□□ 1.12
VRK2-205ENST00000432057 DICER1Q9UPY3 1922 aaKnown RBP22.02■■□□□ 1.12
VRK2-205ENST00000432057 DOCK1Q14185 1865 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 KLRC4O43908 158 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 CCZ1BP86790 482 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 CCZ1P86791 482 aaPredicted RBP22.02■■□□□ 1.12
VRK2-205ENST00000432057 GRB10Q13322 594 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 PTPN21Q16825 1174 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 HAS1Q92839 578 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 GJA10Q969M2 543 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 GLIS2Q9BZE0 524 aaPredicted RBP22.02■■□□□ 1.12
VRK2-205ENST00000432057 VCPKMTQ9H867 229 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 GJA3Q9Y6H8 435 aa22.02■■□□□ 1.12
VRK2-205ENST00000432057 COBLO75128 1261 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 MYL1P05976 194 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 MAP3K10Q02779 954 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 AP3B2Q13367 1082 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 KMT5BQ4FZB7 885 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 MICALL2Q8IY33 904 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 PNMA5Q96PV4 448 aa22.01■■□□□ 1.11
VRK2-205ENST00000432057 ASTN2O75129 1339 aaPredicted RBP22.01■■□□□ 1.11
VRK2-205ENST00000432057 OPLAHO14841 1288 aa22■■□□□ 1.11
VRK2-205ENST00000432057 ARMCX5Q6P1M9 558 aa22■■□□□ 1.11
VRK2-205ENST00000432057 VSTM4Q8IW00 320 aa22■■□□□ 1.11
VRK2-205ENST00000432057 NLGN2Q8NFZ4 835 aa22■■□□□ 1.11
VRK2-205ENST00000432057 TEPSINQ96N21 525 aa22■■□□□ 1.11
VRK2-205ENST00000432057 NAP1L4Q99733 375 aaKnown RBP22■■□□□ 1.11
VRK2-205ENST00000432057 RAB34Q9BZG1 259 aa22■■□□□ 1.11
VRK2-205ENST00000432057 MMP14P50281 582 aa22■■□□□ 1.11
VRK2-205ENST00000432057 KCNB1Q14721 858 aa22■■□□□ 1.11
VRK2-205ENST00000432057 SAMD7Q7Z3H4 446 aa22■■□□□ 1.11
VRK2-205ENST00000432057 CCDC150Q8NCX0 1101 aa22■■□□□ 1.11
VRK2-205ENST00000432057 PDIA5Q14554 519 aa21.99■■□□□ 1.11
VRK2-205ENST00000432057 TBC1D10BQ4KMP7 808 aaPredicted RBP21.99■■□□□ 1.11
VRK2-205ENST00000432057 CDKAL1Q5VV42 579 aa21.99■■□□□ 1.11
VRK2-205ENST00000432057 SNX29Q8TEQ0 813 aa21.99■■□□□ 1.11
VRK2-205ENST00000432057 SH2D4AQ9H788 454 aa21.99■■□□□ 1.11
VRK2-205ENST00000432057 MAPK8IP1Q9UQF2 711 aa21.99■■□□□ 1.11
VRK2-205ENST00000432057 FZD9O00144 591 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 MARCH6O60337 910 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 ASNSP08243 561 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 SKILP12757 684 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 PRCPP42785 496 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 USP11P51784 963 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 PAK1Q13153 545 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 TNFAIP1Q13829 316 aa21.98■■□□□ 1.11
VRK2-205ENST00000432057 DHX8Q14562 1220 aaKnown RBP21.98■■□□□ 1.11
VRK2-205ENST00000432057 DNTTIP2Q5QJE6 756 aaKnown RBP21.98■■□□□ 1.11
VRK2-205ENST00000432057 NELFBQ8WX92 580 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms