RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 GBF1Q92538 1859 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 B4GALT4O60513 344 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 FOSL2P15408 326 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 DNAJB2P25686 324 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 BTNL9Q6UXG8 535 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 RWDD1Q9H446 243 aaPredicted RBP16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 MROH7Q68CQ1 1323 aa16.76■□□□□ 0.27
SMARCE1-205ENST00000431889 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 B4E1Z4 1266 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 ZNF213O14771 459 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 TLR3O15455 904 aaKnown RBP16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 KDM4AO75164 1064 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 CD4P01730 458 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 MYL3P08590 195 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 NUCB1Q02818 461 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 RNF207Q6ZRF8 634 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 PPM1EQ8WY54 764 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 IL25Q9H293 177 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 CXXC1Q9P0U4 656 aaPredicted RBP16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 REV3LO60673 3130 aa16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 SPTBN5Q9NRC6 3674 aaKnown RBP16.75■□□□□ 0.27
SMARCE1-205ENST00000431889 RPS6P62753 249 aaKnown RBP16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 OTOP2Q7RTS6 562 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 TMEM199Q8N511 208 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 SCLYQ96I15 445 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 HIPK3Q9H422 1215 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 VAT1LQ9HCJ6 419 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 CHD9Q3L8U1 2897 aa16.74■□□□□ 0.27
SMARCE1-205ENST00000431889 SCN5AQ14524 2016 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 CYP2C9P11712 490 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 PPIGQ13427 754 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 USP38Q8NB14 1042 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 TIFAQ96CG3 184 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 VTA1Q9NP79 307 aa16.73■□□□□ 0.27
SMARCE1-205ENST00000431889 ESR2Q92731 530 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 WNT8AQ9H1J5 351 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 MYH6P13533 1939 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 CHD7Q9P2D1 2997 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 RABGGTBP53611 331 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 NKX3-2P78367 333 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 PDE4DQ08499 809 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 FAM47CQ5HY64 1035 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 SLC43A3Q8NBI5 491 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 PNMA1Q8ND90 353 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 MORC4Q8TE76 937 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 ZNF576Q9H609 170 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 PRDM6Q9NQX0 595 aa16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 ADD3Q9UEY8 706 aaKnown RBP16.72■□□□□ 0.27
SMARCE1-205ENST00000431889 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 ZEB2O60315 1214 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 ARIH2O95376 493 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 SNHG28P0DPA3 235 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 PRDM12Q9H4Q4 367 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 KAT14Q9H8E8 782 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 ZSWIM5Q9P217 1185 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
SMARCE1-205ENST00000431889 SORBS3O60504 671 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 MYOGP15173 224 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 PDE4AP27815 886 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 TTC14Q96N46 770 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 TAAR1Q96RJ0 339 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
SMARCE1-205ENST00000431889 CABYRO75952 493 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 FGBP02675 491 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 MFAP1P55081 439 aaKnown RBP16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 PURAQ00577 322 aaKnown RBP16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 CHST3Q7LGC8 479 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 ENAHQ8N8S7 591 aaPredicted RBP16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 NKX2-4Q9H2Z4 354 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 XIRP2A4UGR9 3374 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 TNKSO95271 1327 aa16.69■□□□□ 0.26
SMARCE1-205ENST00000431889 PPP2R5BQ15173 497 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 VWCEQ96DN2 955 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms