RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 CYP2C19P33261 490 aa23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 CACNB2Q08289 660 aaPredicted RBP23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 SCRN1Q12765 414 aa23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 STK3Q13188 491 aa23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 PWP2Q15269 919 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 MTFR1Q15390 333 aa23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 CPLX2Q6PUV4 134 aaKnown RBP23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 ZNF713Q8N859 430 aaPredicted RBP23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 TBC1D5Q92609 795 aa23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 RNF26Q9BY78 433 aaPredicted RBP23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 NRBP1Q9UHY1 535 aa23.18■■□□□ 1.3
CSNK1E-207ENST00000430335 RPTORQ8N122 1335 aa23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 CPLX1O14810 134 aa23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 CALML3P27482 149 aa23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 HSD17B4P51659 736 aa23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 DNERQ8NFT8 737 aa23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 SYTL5Q8TDW5 730 aaPredicted RBP23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 ADD3Q9UEY8 706 aaKnown RBP23.17■■□□□ 1.3
CSNK1E-207ENST00000430335 CENPFP49454 3210 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 ASTN1O14525 1302 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 ASB14A6NK59 587 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 CFBP00751 764 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 CCL5P13501 91 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 ME3Q16798 604 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 PHKBQ93100 1093 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 HMX1Q9NP08 348 aaPredicted RBP23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 LIMCH1Q9UPQ0 1083 aa23.16■■□□□ 1.3
CSNK1E-207ENST00000430335 AKAP17AQ02040 695 aaKnown RBP23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 WWC2Q6AWC2 1192 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 PPP1R18Q6NYC8 613 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 NOL8Q76FK4 1167 aaKnown RBP23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 HEATR3Q7Z4Q2 680 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 TEX2Q8IWB9 1127 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 MORC4Q8TE76 937 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 PURBQ96QR8 312 aaKnown RBP23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 UNC93B1Q9H1C4 597 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 PAK6Q9NQU5 681 aaPredicted RBP23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 BARHL2Q9NY43 387 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 PLXNA1Q9UIW2 1896 aa23.15■■□□□ 1.3
CSNK1E-207ENST00000430335 CCDC85CA6NKD9 419 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 GCOM1H8Y6P7 765 aaPredicted RBP23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 ST18O60284 1047 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 CDKL5O76039 1030 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 POLR2MP0CAP2 368 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 CYBAP13498 195 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 SCG2P13521 617 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 ALDH5A1P51649 535 aaPredicted RBP23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 PKN1Q16512 942 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 ARMCX2Q7L311 632 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 TRIM22Q8IYM9 498 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 GPKOWQ92917 476 aaPredicted RBP eCLIP23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 GTF3C6Q969F1 213 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 TMEM106CQ9BVX2 250 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 SLC26A6Q9BXS9 759 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.14■■□□□ 1.295e-6■■■■■ 36
CSNK1E-207ENST00000430335 RNF208Q9H0X6 261 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 COL20A1Q9P218 1284 aa23.14■■□□□ 1.29
CSNK1E-207ENST00000430335 PIK3CDO00329 1044 aa23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 LARGE1O95461 756 aa23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 SNAI1O95863 264 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 MYCP01106 439 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 GJB1P08034 283 aa23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 SSRP1Q08945 709 aaKnown RBP23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 TRPV1Q8NER1 839 aa23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 ZSCAN31Q96LW9 406 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 CNPY2Q9Y2B0 182 aa23.13■■□□□ 1.29
CSNK1E-207ENST00000430335 STXBP3O00186 592 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 EDNRBP24530 442 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 CCND3P30281 292 aaPredicted RBP23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 TYW1BQ6NUM6 668 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 TAAR1Q96RJ0 339 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 MPHOSPH6Q99547 160 aaKnown RBP23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 ABHD16BQ9H3Z7 469 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 PSTPIP2Q9H939 334 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 LCTP09848 1927 aa23.12■■□□□ 1.29
CSNK1E-207ENST00000430335 B4DLN1 442 aa23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 DEXIO95424 95 aa23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 MRPL12P52815 198 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 NAPAP54920 295 aa23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 NECAB1Q8N987 351 aa23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 NSUN6Q8TEA1 469 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 CUL5Q93034 780 aa23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 RMDN3Q96TC7 470 aa23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 SH2B1Q9NRF2 756 aaPredicted RBP23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 RBBP6Q7Z6E9 1792 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-207ENST00000430335 STK36Q9NRP7 1315 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 MEIS2O14770 477 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 ZNF865P0CJ78 1059 aaPredicted RBP23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 CAPN2P17655 700 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 HOXA13P31271 388 aaPredicted RBP23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 ACVR2BQ13705 512 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 PRAMEF19Q5SWL8 479 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 IWS1Q96ST2 819 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 KATNBL1Q9H079 304 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 GLT8D2Q9H1C3 349 aa23.1■■□□□ 1.29
CSNK1E-207ENST00000430335 ESYT2A0FGR8 921 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 SEPT4O43236 478 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 MSCO60682 206 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms