RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CDC37Q16543 378 aaPredicted RBP19.77■□□□□ 0.76
UBE3D-204ENST00000430071 IFIT1BQ5T764 474 aaKnown RBP19.77■□□□□ 0.76
UBE3D-204ENST00000430071 C1orf53Q5VUE5 145 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 TDHQ8IZJ6 230 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 UBAC1Q9BSL1 405 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 USP26Q9BXU7 913 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 JMJD4Q9H9V9 463 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 MYO9BQ13459 2157 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 WDR19Q8NEZ3 1342 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 PQBP1O60828 265 aaKnown RBP19.76■□□□□ 0.75
UBE3D-204ENST00000430071 CST5P28325 142 aaPredicted RBP19.76■□□□□ 0.75
UBE3D-204ENST00000430071 ANTXR2P58335 489 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 QRICH1Q2TAL8 776 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 GNASQ5JWF2 1037 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 RNF207Q6ZRF8 634 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 NOL8Q76FK4 1167 aaKnown RBP19.76■□□□□ 0.75
UBE3D-204ENST00000430071 RASEFQ8IZ41 740 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 BADQ92934 168 aa19.76■□□□□ 0.75
UBE3D-204ENST00000430071 EPB41L2O43491 1005 aaKnown RBP19.75■□□□□ 0.75
UBE3D-204ENST00000430071 PARP1P09874 1014 aaKnown RBP19.75■□□□□ 0.75
UBE3D-204ENST00000430071 ASPRV1Q53RT3 343 aa19.75■□□□□ 0.75
UBE3D-204ENST00000430071 GPHNQ9NQX3 736 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-204ENST00000430071 STARD7Q9NQZ5 370 aa19.75■□□□□ 0.75
UBE3D-204ENST00000430071 COL20A1Q9P218 1284 aa19.75■□□□□ 0.75
UBE3D-204ENST00000430071 MAD2L2Q9UI95 211 aa19.75■□□□□ 0.75
UBE3D-204ENST00000430071 TRIP12Q14669 1992 aaPredicted RBP19.75■□□□□ 0.75
UBE3D-204ENST00000430071 DOCK5Q9H7D0 1870 aa19.74■□□□□ 0.75
UBE3D-204ENST00000430071 DYNC1LI2O43237 492 aaPredicted RBP19.74■□□□□ 0.75
UBE3D-204ENST00000430071 HSPA4P34932 840 aa19.74■□□□□ 0.75
UBE3D-204ENST00000430071 NT5C2P49902 561 aa19.74■□□□□ 0.75
UBE3D-204ENST00000430071 FAAP100Q0VG06 881 aa19.74■□□□□ 0.75
UBE3D-204ENST00000430071 TLK2Q86UE8 772 aa19.74■□□□□ 0.75
UBE3D-204ENST00000430071 KCNB2Q92953 911 aa19.74■□□□□ 0.75
UBE3D-204ENST00000430071 MOXD2PA6NHM9 499 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 PPP1R11O60927 126 aaPredicted RBP19.73■□□□□ 0.75
UBE3D-204ENST00000430071 NKX3-2P78367 333 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 C9orf50Q5SZB4 431 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 RNF20Q5VTR2 975 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 MB21D2Q8IYB1 491 aaPredicted RBP19.73■□□□□ 0.75
UBE3D-204ENST00000430071 LBHD1Q9BQE6 289 aaPredicted RBP19.73■□□□□ 0.75
UBE3D-204ENST00000430071 PRKAG2Q9UGJ0 569 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 COL6A3P12111 3177 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 SCN10AQ9Y5Y9 1956 aa19.73■□□□□ 0.75
UBE3D-204ENST00000430071 KLRF2D3W0D1 207 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 OPLAHO14841 1288 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 IFIT3O14879 490 aaKnown RBP19.72■□□□□ 0.75
UBE3D-204ENST00000430071 DHX16O60231 1041 aaKnown RBP19.72■□□□□ 0.75
UBE3D-204ENST00000430071 CLTBP09497 229 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 CDK7P50613 346 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 TSGA10IPQ3SY00 556 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 IQSEC1Q6DN90 963 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 CXCL17Q6UXB2 119 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 TAAR1Q96RJ0 339 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 VTA1Q9NP79 307 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 GRIN2DO15399 1336 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 SCN5AQ14524 2016 aa19.72■□□□□ 0.75
UBE3D-204ENST00000430071 PALM3A6NDB9 673 aaPredicted RBP19.71■□□□□ 0.75
UBE3D-204ENST00000430071 EDNRBP24530 442 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 EPHB4P54760 987 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 TRDNQ13061 729 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 SHHQ15465 462 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 LRIT3Q3SXY7 679 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 FBXO11Q86XK2 927 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 PCSK9Q8NBP7 692 aaKnown RBP19.71■□□□□ 0.75
UBE3D-204ENST00000430071 NCOA7Q8NI08 942 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 IGDCC4Q8TDY8 1250 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 NUP133Q8WUM0 1156 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 COPS5Q92905 334 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 VTI1AQ96AJ9 217 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 SPC25Q9HBM1 224 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 ADD3Q9UEY8 706 aaKnown RBP19.71■□□□□ 0.75
UBE3D-204ENST00000430071 SNX14Q9Y5W7 946 aa19.71■□□□□ 0.75
UBE3D-204ENST00000430071 CYTH3O43739 400 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 GRM4Q14833 912 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 FSCN1Q16658 493 aaKnown RBP19.7■□□□□ 0.74
UBE3D-204ENST00000430071 ADCK5Q3MIX3 580 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 Q7L0L9 218 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 ANKRD33Q7Z3H0 272 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 RALYLQ86SE5 291 aaKnown RBP19.7■□□□□ 0.74
UBE3D-204ENST00000430071 SYTL5Q8TDW5 730 aaPredicted RBP19.7■□□□□ 0.74
UBE3D-204ENST00000430071 MTMR8Q96EF0 704 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 GLT1D1Q96MS3 346 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 ELP1O95163 1332 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 RBM47A0AV96 593 aaKnown RBP19.7■□□□□ 0.74
UBE3D-204ENST00000430071 KIAA0355O15063 1070 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 ARIH2O95376 493 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 PSMC6P62333 389 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 WTAPQ15007 396 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 DUSP28Q4G0W2 176 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 PPP1R13LQ8WUF5 828 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 WDR11Q9BZH6 1224 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 TMEM39AQ9NV64 488 aa19.7■□□□□ 0.74
UBE3D-204ENST00000430071 ABCB11O95342 1321 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 GBF1Q92538 1859 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 ARVCFO00192 962 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 TROAPQ12815 778 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 RGS22Q8NE09 1264 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 PIGSQ96S52 555 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 MYL10Q9BUA6 226 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 AP5M1Q9H0R1 490 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms