RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 GCOM1H8Y6P7 765 aaPredicted RBP17.23■□□□□ 0.35
GARNL3-204ENST00000429629 HMGCRP04035 888 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 POLR2MP0CAP2 368 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
GARNL3-204ENST00000429629 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 MAP3K21Q5TCX8 1036 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 MFSD14CQ5VZR4 134 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 MCTP2Q6DN12 878 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 SYTL5Q8TDW5 730 aaPredicted RBP17.23■□□□□ 0.35
GARNL3-204ENST00000429629 MORC4Q8TE76 937 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 WASF1Q92558 559 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 PHKBQ93100 1093 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 TINF2Q9BSI4 451 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 SLC26A6Q9BXS9 759 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 PSTPIP2Q9H939 334 aa17.23■□□□□ 0.35
GARNL3-204ENST00000429629 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
GARNL3-204ENST00000429629 LARGE1O95461 756 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 PGK2P07205 417 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 SNX21Q969T3 373 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 IWS1Q96ST2 819 aa17.22■□□□□ 0.35
GARNL3-204ENST00000429629 MPHOSPH6Q99547 160 aaKnown RBP17.22■□□□□ 0.35
GARNL3-204ENST00000429629 hCG_1642624A0A1W2PR95 340 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 SOWAHBA6NEL2 793 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 STXBP3O00186 592 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 UBXN2AP68543 259 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 GALNT17Q6IS24 598 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 NECAB1Q8N987 351 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
GARNL3-204ENST00000429629 NSUN6Q8TEA1 469 aaKnown RBP17.21■□□□□ 0.35
GARNL3-204ENST00000429629 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 TRIB2Q92519 343 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 CUL5Q93034 780 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 FGD4Q96M96 766 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 ZMYND12Q9H0C1 365 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 RIC8AQ9NPQ8 531 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
GARNL3-204ENST00000429629 MEIS2O14770 477 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 CFBP00751 764 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
GARNL3-204ENST00000429629 XBP1P17861 261 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 EDNRBP24530 442 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 CALML3P27482 149 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 GNA11P29992 359 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 HMGN5P82970 282 aaKnown RBP17.2■□□□□ 0.34
GARNL3-204ENST00000429629 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 CCDC148Q8NFR7 591 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 ZNF333Q96JL9 665 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 FLRT1Q9NZU1 646 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
GARNL3-204ENST00000429629 SMCO2A6NFE2 343 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 ELNP15502 786 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 TAL1P17542 331 aaPredicted RBP17.19■□□□□ 0.34
GARNL3-204ENST00000429629 NAPAP54920 295 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 CCL14Q16627 93 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 XRRA1Q6P2D8 792 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 SLC30A10Q6XR72 485 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
GARNL3-204ENST00000429629 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
GARNL3-204ENST00000429629 RPTORQ8N122 1335 aa17.19■□□□□ 0.34
GARNL3-204ENST00000429629 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
GARNL3-204ENST00000429629 INHAP05111 366 aa17.18■□□□□ 0.34
GARNL3-204ENST00000429629 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
GARNL3-204ENST00000429629 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-204ENST00000429629 CACNB2Q08289 660 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-204ENST00000429629 ST3GAL1Q11201 340 aa17.18■□□□□ 0.34
GARNL3-204ENST00000429629 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.34
GARNL3-204ENST00000429629 RMDN3Q96TC7 470 aa17.18■□□□□ 0.34
GARNL3-204ENST00000429629 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
GARNL3-204ENST00000429629 ADCY7P51828 1080 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 AP3B2Q13367 1082 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 CUL4AQ13619 759 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 CCDC83Q8IWF9 413 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 SH3TC2Q8TF17 1288 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 HMX1Q9NP08 348 aaPredicted RBP17.17■□□□□ 0.34
GARNL3-204ENST00000429629 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 BIN2Q9UBW5 565 aaPredicted RBP17.17■□□□□ 0.34
GARNL3-204ENST00000429629 CNPY2Q9Y2B0 182 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 ASTN1O14525 1302 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
GARNL3-204ENST00000429629 MSCO60682 206 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 STAM2O75886 525 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 CYBAP13498 195 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
GARNL3-204ENST00000429629 CYP2C19P33261 490 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 CLK2P49760 499 aaKnown RBP17.16■□□□□ 0.34
GARNL3-204ENST00000429629 USP17L6PQ6QN14 398 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 ARMCX2Q7L311 632 aa17.16■□□□□ 0.34
GARNL3-204ENST00000429629 VSIG10LQ86VR7 867 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms