RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SOWAHDA6NJG2 315 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 LGALS16A8MUM7 142 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 ZBTB5O15062 677 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 MRPL12P52815 198 aaKnown RBP15.35■□□□□ 0.05
THBS3-202ENST00000428962 GNG11P61952 73 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 PDE4DQ08499 809 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 COBLL1Q53SF7 1204 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 STRIP1Q5VSL9 837 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 STYK1Q6J9G0 422 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 CPLX3Q8WVH0 158 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.057e-6■■■■□ 22.7
THBS3-202ENST00000428962 CDK5RAP3Q96JB5 506 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
THBS3-202ENST00000428962 MXD3Q9BW11 206 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 LRRC27Q9C0I9 530 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 LRWD1Q9UFC0 647 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
THBS3-202ENST00000428962 A0A1W2PQC6 194 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 COBLO75128 1261 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 URI1O94763 535 aaPredicted RBP15.34■□□□□ 0.05
THBS3-202ENST00000428962 GCFC2P16383 781 aaKnown RBP15.34■□□□□ 0.05
THBS3-202ENST00000428962 CCNE1P24864 410 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 TXKP42681 527 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 UBXN1Q04323 297 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 PDIA5Q14554 519 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 NAA30Q147X3 362 aaPredicted RBP15.34■□□□□ 0.05
THBS3-202ENST00000428962 ELF2Q15723 593 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 PPP4R3AQ6IN85 833 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 SV2BQ7L1I2 683 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 P2RX5Q93086 422 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 TRIM34Q9BYJ4 488 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 ABHD10Q9NUJ1 306 aa15.34■□□□□ 0.05
THBS3-202ENST00000428962 TRIM49BA6NDI0 452 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.05
THBS3-202ENST00000428962 TNNI2P48788 182 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 FXR1P51114 621 aaKnown RBP eCLIP15.33■□□□□ 0.05
THBS3-202ENST00000428962 ATP2B2Q01814 1243 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 TTI2Q6NXR4 508 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 CYP26C1Q6V0L0 522 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 CLEC10AQ8IUN9 316 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 CREBRFQ8IUR6 639 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 DCAF4Q8WV16 495 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 MTMR8Q96EF0 704 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 ARID3AQ99856 593 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 DESI2Q9BSY9 194 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 MMTAG2Q9BU76 263 aaKnown RBP15.33■□□□□ 0.05
THBS3-202ENST00000428962 IDI2Q9BXS1 227 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 ADGRG1Q9Y653 693 aa15.33■□□□□ 0.05
THBS3-202ENST00000428962 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.04
THBS3-202ENST00000428962 KRT79Q5XKE5 535 aa15.33■□□□□ 0.04
THBS3-202ENST00000428962 RAD9BQ6WBX8 426 aa15.33■□□□□ 0.04
THBS3-202ENST00000428962 CSGALNACT2Q8N6G5 542 aa15.33■□□□□ 0.04
THBS3-202ENST00000428962 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
THBS3-202ENST00000428962 DBNDD1Q9H9R9 158 aa15.33■□□□□ 0.04
THBS3-202ENST00000428962 PI4KBQ9UBF8 816 aa15.33■□□□□ 0.04
THBS3-202ENST00000428962 PVALEFA0A1B0GWK0 134 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 H0YIN7 160 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 SLC37A4O43826 429 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 KIF5CO60282 957 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 TDP2O95551 362 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 DNM2P50570 870 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 NFIAQ12857 509 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 MTF1Q14872 753 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 IRF2BP1Q8IU81 584 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 LRRC15Q8TF66 581 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 NYAP2Q9P242 653 aa15.32■□□□□ 0.04
THBS3-202ENST00000428962 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.32■□□□□ 0.04
THBS3-202ENST00000428962 V9GYY5 206 aaPredicted RBP15.32■□□□□ 0.04
THBS3-202ENST00000428962 PMS1P54277 932 aaKnown RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 GRB10Q13322 594 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 MKL1Q969V6 931 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 EFCAB8A8MWE9 144 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 SLC26A4O43511 780 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 ECE2O60344 883 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 POLD1P28340 1107 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
THBS3-202ENST00000428962 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 DACT2Q5SW24 774 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 MCTP2Q6DN12 878 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 TTBK2Q6IQ55 1244 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 SNX29Q8TEQ0 813 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 UBXN4Q92575 508 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 KIFC2Q96AC6 838 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 WDR24Q96S15 920 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 DDX25Q9UHL0 483 aaKnown RBP15.31■□□□□ 0.04
THBS3-202ENST00000428962 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
THBS3-202ENST00000428962 KDM3AQ9Y4C1 1321 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms