RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 CDK17Q00537 523 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 RASSF7Q02833 373 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 WDR59Q6PJI9 974 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 SMCR8Q8TEV9 937 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 AENQ8WTP8 325 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 LRRC45Q96CN5 670 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 ZNF287Q9HBT7 754 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 ARFGEF2Q9Y6D5 1785 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 SH2D4AQ9H788 454 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 C5P01031 1676 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 A0A1W2PQJ5 194 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 CCNT1O60563 726 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 PLCG1P19174 1290 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 GYG1P46976 350 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 FIGNQ5HY92 759 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 TTI2Q6NXR4 508 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 GPIHBP1Q8IV16 184 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 ZNF507Q8TCN5 953 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 PIGBQ92521 554 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 ERGIC2Q96RQ1 377 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 SLC39A2Q9NP94 309 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 GEMIN8Q9NWZ8 242 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 E7EVH7 732 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 PDE2AO00408 941 aaPredicted RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 TSPY3P0CV98 308 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 TSPY8P0CW00 308 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 NR1D1P20393 614 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 PP2D1A8MPX8 630 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 GCOM1H8Y6P7 765 aaPredicted RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 CPP00450 1065 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 MYZAPP0CAP1 466 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 MYBL2P10244 700 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 IL6STP40189 918 aaPredicted RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 ANKRD40Q6AI12 368 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 RNF10Q8N5U6 811 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 NLRC4Q9NPP4 1024 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 ARPP21Q9UBL0 812 aaPredicted RBP11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 NFU1Q9UMS0 254 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 PLAGL2Q9UPG8 496 aa11.91□□□□□ -0.5
ATP2C1-204ENST00000428331 TMCO5BA8MYB1 307 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 TFAP4Q01664 338 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 IFFO1Q0D2I5 559 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 WHAMMQ8TF30 809 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 SHOX2O60902 331 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 KRT18P05783 430 aaKnown RBP11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 ARID5AQ03989 594 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 TRAF5O00463 557 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 MEFVO15553 781 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 PMS1P54277 932 aaKnown RBP11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 FBXW10Q5XX13 1052 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
ATP2C1-204ENST00000428331 SPATA31A3Q5VYP0 1347 aa11.9□□□□□ -0.51
ATP2C1-204ENST00000428331 WNT7AO00755 349 aa11.9□□□□□ -0.51
ATP2C1-204ENST00000428331 HNRNPH1P31943 449 aaKnown RBP11.9□□□□□ -0.51
ATP2C1-204ENST00000428331 KRT12Q99456 494 aa11.9□□□□□ -0.51
ATP2C1-204ENST00000428331 TACC3Q9Y6A5 838 aa11.9□□□□□ -0.51
ATP2C1-204ENST00000428331 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 HMGB1P1B2RPK0 211 aaPredicted RBP11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 NF2P35240 595 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 CREG2Q8IUH2 290 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 KLHL7Q8IXQ5 586 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 SPAG5Q96R06 1193 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 PPANQ9NQ55 473 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 TXKP42681 527 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 KLK7P49862 253 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 FUT2Q10981 343 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 MTRQ99707 1265 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 TRIM9Q9C026 710 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 CAPN6Q9Y6Q1 641 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 BAZ2BQ9UIF8 2168 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 ORC4O43929 436 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 CCDC172P0C7W6 258 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 TECP42680 631 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 IFT88Q13099 833 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 UBE4AQ14139 1066 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 RPS6KA1Q15418 735 aa11.89□□□□□ -0.51
ATP2C1-204ENST00000428331 SPTY2D1Q68D10 685 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms