RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 USP17L17D6RBQ6 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L19D6RCP7 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L20D6RJB6 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L24Q0WX57 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L6PQ6QN14 398 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 CCAR2Q8N163 923 aaKnown RBP19.43■□□□□ 0.7
PRDM5-203ENST00000428209 DDX25Q9UHL0 483 aaKnown RBP19.43■□□□□ 0.7
PRDM5-203ENST00000428209 KLRC4O43908 158 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 APTXQ7Z2E3 356 aaKnown RBP19.43■□□□□ 0.7
PRDM5-203ENST00000428209 MYRIPQ8NFW9 859 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 CTAGE1Q96RT6 745 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 VEZTQ9HBM0 779 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 BMP3P12645 472 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 SNAP25P60880 206 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 TBX2Q13207 712 aaPredicted RBP19.42■□□□□ 0.7
PRDM5-203ENST00000428209 PDIA5Q14554 519 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 CCDC112Q8NEF3 446 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 KCND1Q9NSA2 647 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 ATF5Q9Y2D1 282 aaPredicted RBP19.42■□□□□ 0.7
PRDM5-203ENST00000428209 A0A1W2PRG0 241 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 RHOBTB3O94955 611 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 AMPD3Q01432 767 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 GOLGA8FQ08AF8 430 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 GOLGA8DPQ0D2H9 430 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 SPDYE2Q495Y8 402 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 FILIP1LQ4L180 1135 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 AMNQ9BXJ7 453 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 PIM2Q9P1W9 311 aa19.42■□□□□ 0.7
PRDM5-203ENST00000428209 MARCH6O60337 910 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 SEMA3FQ13275 785 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 SYDE2Q5VT97 1194 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 ADSSL1Q8N142 457 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 ADD3Q9UEY8 706 aaKnown RBP19.41■□□□□ 0.7
PRDM5-203ENST00000428209 POTEMA6NI47 508 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 TEX33O43247 280 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 GCFC2P16383 781 aaKnown RBP19.41■□□□□ 0.7
PRDM5-203ENST00000428209 PTPN14Q15678 1187 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 E4F1Q66K89 784 aaPredicted RBP19.41■□□□□ 0.7
PRDM5-203ENST00000428209 FBXO11Q86XK2 927 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 SPICE1Q8N0Z3 855 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 AGBL3Q8NEM8 1001 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 CCDC47Q96A33 483 aaKnown RBP19.41■□□□□ 0.7
PRDM5-203ENST00000428209 CDK5RAP3Q96JB5 506 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 C7orf25Q9BPX7 421 aa19.41■□□□□ 0.7
PRDM5-203ENST00000428209 MYH7BA7E2Y1 1941 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 KCNJ6P48051 423 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 GRB10Q13322 594 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 STIM1Q13586 685 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 NAP1L4Q99733 375 aaKnown RBP19.4■□□□□ 0.7
PRDM5-203ENST00000428209 TMX1Q9H3N1 280 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 ARHGEF10LQ9HCE6 1279 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 ARFGEF1Q9Y6D6 1849 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 ECE1P42892 770 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 ASIC1P78348 528 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 USH1GQ495M9 461 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 KRT79Q5XKE5 535 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
PRDM5-203ENST00000428209 GIMAP8Q8ND71 665 aaPredicted RBP19.4■□□□□ 0.7
PRDM5-203ENST00000428209 CXCL9Q07325 125 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 CEP135Q66GS9 1140 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 NYAP1Q6ZVC0 841 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 SV2BQ7L1I2 683 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 CREBRFQ8IUR6 639 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 HAS1Q92839 578 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 ANO3Q9BYT9 981 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 SYNPO2Q9UMS6 1093 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 PSDA5PKW4 1024 aaPredicted RBP19.39■□□□□ 0.69
PRDM5-203ENST00000428209 MEIS2O14770 477 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 USP11P51784 963 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 TGFB2P61812 414 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 SPAG1Q07617 926 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 PDE4DQ08499 809 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 BTNL9Q6UXG8 535 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 SNX29Q8TEQ0 813 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 PNMA5Q96PV4 448 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 TMEM39BQ9GZU3 492 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 EXOC1Q9NV70 894 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
PRDM5-203ENST00000428209 H7C1D1 291 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 PSMA7O14818 248 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 ADKP55263 362 aaKnown RBP19.38■□□□□ 0.69
PRDM5-203ENST00000428209 KRT31Q15323 416 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 FKBP1CQ5VVH2 108 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 MTMR14Q8NCE2 650 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 ANKRD20A12PQ8NF67 263 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 ACER1Q8TDN7 264 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 ZNF592Q92610 1267 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 LIMA1Q9UHB6 759 aaKnown RBP19.38■□□□□ 0.69
PRDM5-203ENST00000428209 PCDHA12Q9UN75 941 aa19.38■□□□□ 0.69
PRDM5-203ENST00000428209 TRIM49BA6NDI0 452 aa19.37■□□□□ 0.69
PRDM5-203ENST00000428209 DYNC1I1O14576 645 aa19.37■□□□□ 0.69
PRDM5-203ENST00000428209 CCT6AP40227 531 aaKnown RBP19.37■□□□□ 0.69
PRDM5-203ENST00000428209 AP3B2Q13367 1082 aa19.37■□□□□ 0.69
PRDM5-203ENST00000428209 MIGA2Q7L4E1 593 aa19.37■□□□□ 0.69
PRDM5-203ENST00000428209 TC2NQ8N9U0 490 aa19.37■□□□□ 0.69
PRDM5-203ENST00000428209 GJA10Q969M2 543 aa19.37■□□□□ 0.69
PRDM5-203ENST00000428209 NUDT12Q9BQG2 462 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms