RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 STOX1Q6ZVD7 989 aa21.49■■□□□ 1.03
PSPC1-202ENST00000427943 RALYLQ86SE5 291 aaKnown RBP21.49■■□□□ 1.03
PSPC1-202ENST00000427943 STAG2Q8N3U4 1231 aa21.49■■□□□ 1.03
PSPC1-202ENST00000427943 VTI1AQ96AJ9 217 aa21.49■■□□□ 1.03
PSPC1-202ENST00000427943 VAT1LQ9HCJ6 419 aa21.49■■□□□ 1.03
PSPC1-202ENST00000427943 E7EWF7 191 aa21.48■■□□□ 1.03
PSPC1-202ENST00000427943 DYNC1LI2O43237 492 aaPredicted RBP21.48■■□□□ 1.03
PSPC1-202ENST00000427943 FAAP100Q0VG06 881 aa21.48■■□□□ 1.03
PSPC1-202ENST00000427943 IQSEC1Q6DN90 963 aa21.48■■□□□ 1.03
PSPC1-202ENST00000427943 AP5M1Q9H0R1 490 aa21.48■■□□□ 1.03
PSPC1-202ENST00000427943 ELP1O95163 1332 aa21.48■■□□□ 1.03
PSPC1-202ENST00000427943 ABCB11O95342 1321 aa21.48■■□□□ 1.03
PSPC1-202ENST00000427943 A0A0U1RQG5 324 aaPredicted RBP21.47■■□□□ 1.03
PSPC1-202ENST00000427943 DCDC2CA8MYV0 355 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 IFIT3O14879 490 aaKnown RBP21.47■■□□□ 1.03
PSPC1-202ENST00000427943 NKX3-2P78367 333 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 FSCN1Q16658 493 aaKnown RBP21.47■■□□□ 1.03
PSPC1-202ENST00000427943 CXCL17Q6UXB2 119 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 CHST3Q7LGC8 479 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 ANKRD33Q7Z3H0 272 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 TBC1D5Q92609 795 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 JMJD4Q9H9V9 463 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 SENP2Q9HC62 589 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 TMEM39AQ9NV64 488 aa21.47■■□□□ 1.03
PSPC1-202ENST00000427943 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
PSPC1-202ENST00000427943 LAMA2P24043 3122 aaKnown RBP21.46■■□□□ 1.03
PSPC1-202ENST00000427943 LOC102724159A0A0B4J2E5 919 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 KLRF2D3W0D1 207 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 KIAA0355O15063 1070 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 RAG1P15918 1043 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 PDE4DQ08499 809 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 PWP2Q15269 919 aaKnown RBP21.46■■□□□ 1.03
PSPC1-202ENST00000427943 C9orf50Q5SZB4 431 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 FBXO11Q86XK2 927 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 NCOA7Q8NI08 942 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 MAP4K1Q92918 833 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 MAD2L2Q9UI95 211 aa21.46■■□□□ 1.03
PSPC1-202ENST00000427943 ERICH2A1L162 156 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 CDK7P50613 346 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 SHHQ15465 462 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 Q7L0L9 218 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 DNERQ8NFT8 737 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 TOX2Q96NM4 488 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 WDR11Q9BZH6 1224 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 MROH7Q68CQ1 1323 aa21.45■■□□□ 1.02
PSPC1-202ENST00000427943 ARVCFO00192 962 aa21.44■■□□□ 1.02
PSPC1-202ENST00000427943 EDNRBP24530 442 aa21.44■■□□□ 1.02
PSPC1-202ENST00000427943 ANTXR2P58335 489 aa21.44■■□□□ 1.02
PSPC1-202ENST00000427943 WTAPQ15007 396 aa21.44■■□□□ 1.02
PSPC1-202ENST00000427943 DUSP28Q4G0W2 176 aa21.44■■□□□ 1.02
PSPC1-202ENST00000427943 MPHOSPH6Q99547 160 aaKnown RBP21.44■■□□□ 1.02
PSPC1-202ENST00000427943 COL20A1Q9P218 1284 aa21.44■■□□□ 1.02
PSPC1-202ENST00000427943 MYH7BA7E2Y1 1941 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 RBM47A0AV96 593 aaKnown RBP21.43■■□□□ 1.02
PSPC1-202ENST00000427943 GRM4Q14833 912 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 CENPQQ7L2Z9 268 aaPredicted RBP21.43■■□□□ 1.02
PSPC1-202ENST00000427943 FAM126BQ8IXS8 530 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 RGS22Q8NE09 1264 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 SYTL5Q8TDW5 730 aaPredicted RBP21.43■■□□□ 1.02
PSPC1-202ENST00000427943 ESYT1Q9BSJ8 1104 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 TBX21Q9UL17 535 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 MRPL11Q9Y3B7 192 aaKnown RBP21.43■■□□□ 1.02
PSPC1-202ENST00000427943 Q9Y3F1 56 aa21.43■■□□□ 1.02
PSPC1-202ENST00000427943 PALM3A6NDB9 673 aaPredicted RBP21.42■■□□□ 1.02
PSPC1-202ENST00000427943 ZEB2O60315 1214 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 PPP1R11O60927 126 aaPredicted RBP21.42■■□□□ 1.02
PSPC1-202ENST00000427943 EPHB4P54760 987 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 PSMC6P62333 389 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 SART3Q15020 963 aaKnown RBP21.42■■□□□ 1.02
PSPC1-202ENST00000427943 SLC35G1Q2M3R5 365 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 TMEM67Q5HYA8 995 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 HOMER1Q86YM7 354 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 MB21D2Q8IYB1 491 aaPredicted RBP21.42■■□□□ 1.02
PSPC1-202ENST00000427943 DEFB123Q8N688 67 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 OR6J1Q8NGC5 347 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 TAAR1Q96RJ0 339 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 AMNQ9BXJ7 453 aa21.42■■□□□ 1.02
PSPC1-202ENST00000427943 LSG1Q9H089 658 aaKnown RBP21.42■■□□□ 1.02
PSPC1-202ENST00000427943 SCN10AQ9Y5Y9 1956 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 TLR3O15455 904 aaKnown RBP21.41■■□□□ 1.02
PSPC1-202ENST00000427943 CABYRO75952 493 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 FPGSQ05932 587 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 ITGA7Q13683 1181 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 PPP2R5BQ15173 497 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 GPR153Q6NV75 609 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 MCF2L2Q86YR7 1114 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 COPS5Q92905 334 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 PPP1R12CQ9BZL4 782 aa21.41■■□□□ 1.02
PSPC1-202ENST00000427943 GRIN2DO15399 1336 aa21.4■■□□□ 1.02
PSPC1-202ENST00000427943 B4DLN1 442 aa21.4■■□□□ 1.02
PSPC1-202ENST00000427943 OPLAHO14841 1288 aa21.4■■□□□ 1.02
PSPC1-202ENST00000427943 ZBTB5O15062 677 aa21.4■■□□□ 1.02
PSPC1-202ENST00000427943 CFBP00751 764 aa21.4■■□□□ 1.02
PSPC1-202ENST00000427943 MRPL12P52815 198 aaKnown RBP21.4■■□□□ 1.02
PSPC1-202ENST00000427943 SCFD2Q8WU76 684 aa21.4■■□□□ 1.02
PSPC1-202ENST00000427943 GPHNQ9NQX3 736 aaPredicted RBP21.4■■□□□ 1.02
PSPC1-202ENST00000427943 ARIH2O95376 493 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 TIMP1P01033 207 aa21.39■■□□□ 1.01
PSPC1-202ENST00000427943 TROAPQ12815 778 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms