RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 FAM133AQ8N9E0 248 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 SLF1Q9BQI6 1058 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 IRF2BPLQ9H1B7 796 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
LSG1-202ENST00000427461 HOMER2Q9NSB8 354 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 CTNNA3Q9UI47 895 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 ABCB7O75027 752 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 KDM4AO75164 1064 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 BFSP2Q13515 415 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 EPC2Q52LR7 807 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
LSG1-202ENST00000427461 ADSSL1Q8N142 457 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 SDR42E1Q8WUS8 393 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 ASIC4Q96FT7 647 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 NSUN3Q9H649 340 aaKnown RBP11.1□□□□□ -0.63
LSG1-202ENST00000427461 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
LSG1-202ENST00000427461 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 NBNO60934 754 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 TBX10O75333 385 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 PDGFBP01127 241 aaPredicted RBP11.09□□□□□ -0.63
LSG1-202ENST00000427461 GTF2F1P35269 517 aaKnown RBP eCLIP11.09□□□□□ -0.63
LSG1-202ENST00000427461 NBL1P41271 181 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 GPM6BQ13491 265 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 CNKSR3Q6P9H4 555 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.09□□□□□ -0.63
LSG1-202ENST00000427461 KIAA1211Q6ZU35 1233 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 Q9Y3F1 56 aa11.09□□□□□ -0.63
LSG1-202ENST00000427461 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 CYP2D7A0A087X1C5 515 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 E9PSI1 815 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 H3BNC9 293 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 ATP2A1O14983 1001 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 LINC01565O15544 149 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 ZBED4O75132 1171 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 CHMP4BP1P59074 171 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 SIGLEC14Q08ET2 396 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 HYAL1Q12794 435 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 G3BP1Q13283 466 aaKnown RBP eCLIP11.08□□□□□ -0.64
LSG1-202ENST00000427461 TNNI3KQ59H18 835 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
LSG1-202ENST00000427461 CHST13Q8NET6 341 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 KIFC2Q96AC6 838 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
LSG1-202ENST00000427461 CTAGE1Q96RT6 745 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
LSG1-202ENST00000427461 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
LSG1-202ENST00000427461 A1CFQ9NQ94 594 aaKnown RBP11.08□□□□□ -0.64
LSG1-202ENST00000427461 SWAP70Q9UH65 585 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 FPGT-TNNI3KV9GXZ4 949 aa11.08□□□□□ -0.64
LSG1-202ENST00000427461 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 MAGEB6P1A0A0J9YX57 407 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 ABHD14A-ACY1A0A1B0GW23 586 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 ASB14A6NK59 587 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 CDK8P49336 464 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 SMAD4Q13485 552 aaKnown RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 MTX1Q13505 466 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 LRRC8DQ7L1W4 858 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 DHX38Q92620 1227 aaKnown RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 SLC38A10Q9HBR0 1119 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 TLR7Q9NYK1 1049 aaKnown RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 FBXO40Q9UH90 709 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
LSG1-202ENST00000427461 CFAP47Q6ZTR5 3102 aa11.07□□□□□ -0.64
LSG1-202ENST00000427461 MICAL3Q7RTP6 2002 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 LCTP09848 1927 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 WDR87Q6ZQQ6 2873 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 LOC730098B7Z3J9 87 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 IGSF3O75054 1194 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 CSPG5O95196 566 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 CXCL10P02778 98 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 PTGISQ16647 500 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 DUSP28Q4G0W2 176 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 DGLUCYQ7Z3D6 616 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
LSG1-202ENST00000427461 AFAP1L1Q8TED9 768 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 NKD2Q969F2 451 aaPredicted RBP11.06□□□□□ -0.64
LSG1-202ENST00000427461 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
LSG1-202ENST00000427461 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
LSG1-202ENST00000427461 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
LSG1-202ENST00000427461 IGFLR1Q9H665 355 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 KANSL2Q9H9L4 492 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 CD207Q9UJ71 328 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
LSG1-202ENST00000427461 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms