RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 RIMBP3BA6NNM3 1639 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 RIMBP3Q9UFD9 1639 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 LCMT1Q9UIC8 334 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 HERC5Q9UII4 1024 aaKnown RBP11.18□□□□□ -0.62
SP1-202ENST00000426431 GIPC1O14908 333 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 MAN1A1P33908 653 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 PAK2Q13177 524 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
SP1-202ENST00000426431 GOLGA8CPA6NN73 597 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 CFAP157Q5JU67 520 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 CCT6BQ92526 530 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 TAB2Q9NYJ8 693 aa11.18□□□□□ -0.62
SP1-202ENST00000426431 RFX1P22670 979 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 ITIH3Q06033 890 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
SP1-202ENST00000426431 TCP11Q8WWU5 503 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
SP1-202ENST00000426431 RASGRF1Q13972 1273 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 NELFCDQ8IXH7 590 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 ABI1Q8IZP0 508 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 SLC16A10Q8TF71 515 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 CYP21A2P08686 494 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 MFAP3P55082 362 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 ANKRD36BP1Q96IX9 119 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 NCAPGQ9BPX3 1015 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 METTL23Q86XA0 190 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 USP28Q96RU2 1077 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 INO80BQ9C086 356 aaPredicted RBP11.17□□□□□ -0.62
SP1-202ENST00000426431 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 SAMD15Q9P1V8 674 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 GMNNO75496 209 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 SLFN12LQ6IEE8 588 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
SP1-202ENST00000426431 MMP1P03956 469 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 VIMP08670 466 aaKnown RBP11.17□□□□□ -0.62
SP1-202ENST00000426431 LMNB1P20700 586 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 HOXD10P28358 340 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 CDK8P49336 464 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 SYT10Q6XYQ8 523 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 MAEAQ7L5Y9 396 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
SP1-202ENST00000426431 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
SP1-202ENST00000426431 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 SCRN1Q12765 414 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 MAP7Q14244 749 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 MAP7D3Q8IWC1 876 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 SEC62Q99442 399 aaKnown RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 M0R2C6 588 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 EVCP57679 992 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 LMNB2Q03252 620 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 PTK2Q05397 1052 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 MRFAP1L1Q96HT8 127 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 PSMC2P35998 433 aaKnown RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 ADAM9Q13443 819 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 ATP2A3Q93084 1043 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 CAPZA3Q96KX2 299 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 NRXN1Q9ULB1 1477 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 ABCB11O95342 1321 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 STAM2O75886 525 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 LCORLQ8N3X6 602 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 GSDMBQ8TAX9 411 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 SASH1O94885 1247 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 CRKP46108 304 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 SPATA24Q86W54 205 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 NT5C1BQ96P26 610 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 HAUS4Q9H6D7 363 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 RIPOR2Q9Y4F9 1068 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 TYW5A2RUC4 315 aaKnown RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 C10orf76Q5T2E6 689 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 BBS5Q8N3I7 341 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 POMGNT1Q8WZA1 660 aa11.16□□□□□ -0.62
SP1-202ENST00000426431 STRBPQ96SI9 672 aaKnown RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 SRP68Q9UHB9 627 aaKnown RBP11.16□□□□□ -0.62
SP1-202ENST00000426431 CYP2J2P51589 502 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 CUL4AQ13619 759 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 MCM6Q14566 821 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 CCDC89Q8N998 374 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 IFT81Q8WYA0 676 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 MAPK8IP1Q9UQF2 711 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 SETD1BQ9UPS6 1966 aaKnown RBP11.15□□□□□ -0.62
SP1-202ENST00000426431 NEXMIFQ5QGS0 1516 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 IKBKBO14920 756 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 RAD17O75943 681 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 MXRA7P84157 204 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 FYB2Q5VWT5 728 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 MXD3Q9BW11 206 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
SP1-202ENST00000426431 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms