RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CDKL5O76039 1030 aa28.24■■■□□ 2.11
VEGFA-209ENST00000425836 IGHA2P01877 340 aa28.24■■■□□ 2.11
VEGFA-209ENST00000425836 SCG2P13521 617 aa28.24■■■□□ 2.11
VEGFA-209ENST00000425836 CALML3P27482 149 aa28.24■■■□□ 2.11
VEGFA-209ENST00000425836 GHRHRQ02643 423 aa28.24■■■□□ 2.11
VEGFA-209ENST00000425836 TRIM22Q8IYM9 498 aa28.24■■■□□ 2.11
VEGFA-209ENST00000425836 SH2B1Q9NRF2 756 aaPredicted RBP28.24■■■□□ 2.11
VEGFA-209ENST00000425836 HTTP42858 3142 aa28.23■■■□□ 2.11
VEGFA-209ENST00000425836 DTNBO60941 627 aa28.23■■■□□ 2.11
VEGFA-209ENST00000425836 CFBP00751 764 aa28.23■■■□□ 2.11
VEGFA-209ENST00000425836 OLFML2BQ68BL8 750 aa28.23■■■□□ 2.11
VEGFA-209ENST00000425836 TYW1BQ6NUM6 668 aa28.23■■■□□ 2.11
VEGFA-209ENST00000425836 BARHL2Q9NY43 387 aa28.23■■■□□ 2.11
VEGFA-209ENST00000425836 SOWAHBA6NEL2 793 aa28.22■■■□□ 2.11
VEGFA-209ENST00000425836 hCG_1984214I3L0E3 225 aa28.22■■■□□ 2.11
VEGFA-209ENST00000425836 STXBP3O00186 592 aa28.22■■■□□ 2.11
VEGFA-209ENST00000425836 MCM2P49736 904 aa28.22■■■□□ 2.11
VEGFA-209ENST00000425836 HSD17B4P51659 736 aa28.22■■■□□ 2.11
VEGFA-209ENST00000425836 ZNF713Q8N859 430 aaPredicted RBP28.22■■■□□ 2.11
VEGFA-209ENST00000425836 SYTL5Q8TDW5 730 aaPredicted RBP28.22■■■□□ 2.11
VEGFA-209ENST00000425836 HMGCRP04035 888 aa28.21■■■□□ 2.11
VEGFA-209ENST00000425836 TRIM32Q13049 653 aa28.21■■■□□ 2.11
VEGFA-209ENST00000425836 ZNF467Q7Z7K2 595 aaPredicted RBP28.21■■■□□ 2.11
VEGFA-209ENST00000425836 CCDC83Q8IWF9 413 aa28.21■■■□□ 2.11
VEGFA-209ENST00000425836 SAMD3Q8N6K7 520 aa28.21■■■□□ 2.11
VEGFA-209ENST00000425836 ARMC5Q96C12 935 aa28.21■■■□□ 2.11
VEGFA-209ENST00000425836 BIN2Q9UBW5 565 aaPredicted RBP28.21■■■□□ 2.11
VEGFA-209ENST00000425836 ASTN1O14525 1302 aa28.21■■■□□ 2.11
VEGFA-209ENST00000425836 MAP3K20Q9NYL2 800 aaKnown RBP28.2■■■□□ 2.11
VEGFA-209ENST00000425836 COL20A1Q9P218 1284 aa28.2■■■□□ 2.11
VEGFA-209ENST00000425836 GCOM1H8Y6P7 765 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-209ENST00000425836 DEXIO95424 95 aa28.2■■■□□ 2.1
VEGFA-209ENST00000425836 INHAP05111 366 aa28.2■■■□□ 2.1
VEGFA-209ENST00000425836 POLR2MP0CAP2 368 aa28.2■■■□□ 2.1
VEGFA-209ENST00000425836 HOXA13P31271 388 aaPredicted RBP28.2■■■□□ 2.1
VEGFA-209ENST00000425836 NAPAP54920 295 aa28.2■■■□□ 2.1
VEGFA-209ENST00000425836 TNS4Q8IZW8 715 aa28.2■■■□□ 2.1
VEGFA-209ENST00000425836 NSUN7Q8NE18 718 aaKnown RBP28.2■■■□□ 2.1
VEGFA-209ENST00000425836 PSTPIP2Q9H939 334 aa28.2■■■□□ 2.1
VEGFA-209ENST00000425836 CYP2C19P33261 490 aa28.19■■■□□ 2.1
VEGFA-209ENST00000425836 MFSD14CQ5VZR4 134 aa28.19■■■□□ 2.1
VEGFA-209ENST00000425836 PPP1R18Q6NYC8 613 aa28.19■■■□□ 2.1
VEGFA-209ENST00000425836 MAMDC4Q6UXC1 1216 aa28.19■■■□□ 2.1
VEGFA-209ENST00000425836 TMX3Q96JJ7 454 aa28.19■■■□□ 2.1
VEGFA-209ENST00000425836 TINF2Q9BSI4 451 aa28.19■■■□□ 2.1
VEGFA-209ENST00000425836 STK36Q9NRP7 1315 aa28.18■■■□□ 2.1
VEGFA-209ENST00000425836 MSL3Q8N5Y2 521 aaKnown RBP28.18■■■□□ 2.1
VEGFA-209ENST00000425836 ZNF333Q96JL9 665 aa28.18■■■□□ 2.1
VEGFA-209ENST00000425836 TAAR1Q96RJ0 339 aa28.18■■■□□ 2.1
VEGFA-209ENST00000425836 MEIS2O14770 477 aa28.17■■■□□ 2.1
VEGFA-209ENST00000425836 JAK2O60674 1132 aa28.17■■■□□ 2.1
VEGFA-209ENST00000425836 ORC3Q9UBD5 711 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-209ENST00000425836 ADD3Q9UEY8 706 aaKnown RBP28.17■■■□□ 2.1
VEGFA-209ENST00000425836 PIK3CDO00329 1044 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 FDPSP14324 419 aaKnown RBP28.16■■■□□ 2.1
VEGFA-209ENST00000425836 UBXN2AP68543 259 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 CACNB2Q08289 660 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-209ENST00000425836 MAP3K21Q5TCX8 1036 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 USP17L6PQ6QN14 398 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 DNERQ8NFT8 737 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 SHISA4Q96DD7 197 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 AIFM3Q96NN9 605 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 SMCO2A6NFE2 343 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 PRKAR2AP13861 404 aaKnown RBP28.16■■■□□ 2.1
VEGFA-209ENST00000425836 ALDH5A1P51649 535 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-209ENST00000425836 LLPHQ9BRT6 129 aaKnown RBP28.16■■■□□ 2.1
VEGFA-209ENST00000425836 VPS54Q9P1Q0 977 aa28.16■■■□□ 2.1
VEGFA-209ENST00000425836 DDX49Q9Y6V7 483 aaKnown RBP28.16■■■□□ 2.1
VEGFA-209ENST00000425836 SYNGAP1Q96PV0 1343 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 MYH6P13533 1939 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 ASB14A6NK59 587 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 SNAI1O95863 264 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-209ENST00000425836 ARMCX2Q7L311 632 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 FCHSD1Q86WN1 690 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 CUL5Q93034 780 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 ABHD8Q96I13 439 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 RIC8AQ9NPQ8 531 aa28.15■■■□□ 2.1
VEGFA-209ENST00000425836 MYCP01106 439 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-209ENST00000425836 ADCY7P51828 1080 aa28.14■■■□□ 2.1
VEGFA-209ENST00000425836 MRPL12P52815 198 aaKnown RBP28.14■■■□□ 2.1
VEGFA-209ENST00000425836 MTFR1Q15390 333 aa28.14■■■□□ 2.1
VEGFA-209ENST00000425836 CCDC12Q8WUD4 166 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-209ENST00000425836 RMDN3Q96TC7 470 aa28.14■■■□□ 2.1
VEGFA-209ENST00000425836 SH3GLB2Q9NR46 395 aa28.14■■■□□ 2.1
VEGFA-209ENST00000425836 ZNFX1Q9P2E3 1918 aaKnown RBP28.13■■■□□ 2.09
VEGFA-209ENST00000425836 ESYT2A0FGR8 921 aa28.13■■■□□ 2.09
VEGFA-209ENST00000425836 UBE2SQ16763 222 aa28.13■■■□□ 2.09
VEGFA-209ENST00000425836 PRAMEF19Q5SWL8 479 aa28.13■■■□□ 2.09
VEGFA-209ENST00000425836 SMARCC2Q8TAQ2 1214 aa28.13■■■□□ 2.09
VEGFA-209ENST00000425836 MORC4Q8TE76 937 aa28.13■■■□□ 2.09
VEGFA-209ENST00000425836 NSUN6Q8TEA1 469 aaKnown RBP28.13■■■□□ 2.09
VEGFA-209ENST00000425836 ZMYND12Q9H0C1 365 aa28.13■■■□□ 2.09
VEGFA-209ENST00000425836 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.13■■■□□ 2.09
VEGFA-209ENST00000425836 LOC102724159A0A0B4J2E5 919 aa28.12■■■□□ 2.09
VEGFA-209ENST00000425836 PWP2Q15269 919 aaKnown RBP28.12■■■□□ 2.09
VEGFA-209ENST00000425836 TRPV1Q8NER1 839 aa28.12■■■□□ 2.09
VEGFA-209ENST00000425836 EDNRBP24530 442 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 ARHGEF16Q5VV41 709 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 TEX2Q8IWB9 1127 aa28.11■■■□□ 2.09
VEGFA-209ENST00000425836 CCDC148Q8NFR7 591 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms