RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 MOXD2PA6NHM9 499 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 CCDC69A6NI79 296 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 ADCY6O43306 1168 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 EPB41L2O43491 1005 aaKnown RBP21.45■■□□□ 1.02
MSH5-207ENST00000425703 CALM1P0DP23 149 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 CALM2P0DP24 149 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 CALM3P0DP25 149 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 SLC35G1Q2M3R5 365 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 CCSAPQ6IQ19 270 aaPredicted RBP21.45■■□□□ 1.02
MSH5-207ENST00000425703 TAPT1Q6NXT6 567 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 SLC39A5Q6ZMH5 540 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 SGMS1Q86VZ5 419 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 PCSK9Q8NBP7 692 aaKnown RBP21.45■■□□□ 1.02
MSH5-207ENST00000425703 CTCFLQ8NI51 663 aaPredicted RBP21.45■■□□□ 1.02
MSH5-207ENST00000425703 KCNB2Q92953 911 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 GPHNQ9NQX3 736 aaPredicted RBP21.45■■□□□ 1.02
MSH5-207ENST00000425703 Q9Y3F1 56 aa21.45■■□□□ 1.02
MSH5-207ENST00000425703 PNMA6FA0A0J9YX94 578 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 CYTH3O43739 400 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 REC8O95072 547 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 HMGB1P09429 215 aaKnown RBP21.44■■□□□ 1.02
MSH5-207ENST00000425703 GNAQP50148 359 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 NFXL1Q6ZNB6 911 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 RASEFQ8IZ41 740 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 SYTL5Q8TDW5 730 aaPredicted RBP21.44■■□□□ 1.02
MSH5-207ENST00000425703 NUP133Q8WUM0 1156 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 SPZ1Q9BXG8 430 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 PRO3102Q9H379 93 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 COLQQ9Y215 455 aaPredicted RBP21.44■■□□□ 1.02
MSH5-207ENST00000425703 GNEQ9Y223 722 aaKnown RBP21.44■■□□□ 1.02
MSH5-207ENST00000425703 PCDHA1Q9Y5I3 950 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 ALPK3Q96L96 1907 aa21.44■■□□□ 1.02
MSH5-207ENST00000425703 PPP1R11O60927 126 aaPredicted RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 ATN1P54259 1190 aaPredicted RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 EXOSC10Q01780 885 aaKnown RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 PDE4DQ08499 809 aa21.43■■□□□ 1.02
MSH5-207ENST00000425703 COL9A3Q14050 684 aaPredicted RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 HABP4Q5JVS0 413 aaKnown RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 CHRDL2Q6WN34 429 aa21.43■■□□□ 1.02
MSH5-207ENST00000425703 DHX32Q7L7V1 743 aaKnown RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 FBXO16Q8IX29 292 aaPredicted RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 NSUN6Q8TEA1 469 aaKnown RBP21.43■■□□□ 1.02
MSH5-207ENST00000425703 PIGSQ96S52 555 aa21.43■■□□□ 1.02
MSH5-207ENST00000425703 SLC12A7Q9Y666 1083 aa21.43■■□□□ 1.02
MSH5-207ENST00000425703 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.42■■□□□ 1.02
MSH5-207ENST00000425703 A0A1W2PQ45 241 aaPredicted RBP21.42■■□□□ 1.02
MSH5-207ENST00000425703 A0A1W2PQY0 241 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 RBM47A0AV96 593 aaKnown RBP21.42■■□□□ 1.02
MSH5-207ENST00000425703 MCM3APO60318 1980 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 LCTP09848 1927 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 C6orf222P0C671 652 aaPredicted RBP21.42■■□□□ 1.02
MSH5-207ENST00000425703 HSPA4P34932 840 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 HSD17B4P51659 736 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 ACLYP53396 1101 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 RTP1P59025 263 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 KCNA10Q16322 511 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 EEPD1Q7L9B9 569 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 HOMER1Q86YM7 354 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 TBC1D5Q92609 795 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 FERMT2Q96AC1 680 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 IWS1Q96ST2 819 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 PDGFCQ9NRA1 345 aa21.42■■□□□ 1.02
MSH5-207ENST00000425703 DDX49Q9Y6V7 483 aaKnown RBP21.42■■□□□ 1.02
MSH5-207ENST00000425703 ELP1O95163 1332 aa21.41■■□□□ 1.02
MSH5-207ENST00000425703 OPLAHO14841 1288 aa21.41■■□□□ 1.02
MSH5-207ENST00000425703 CTAGE5O15320 804 aa21.41■■□□□ 1.02
MSH5-207ENST00000425703 SMPD1P17405 629 aa21.41■■□□□ 1.02
MSH5-207ENST00000425703 DUSP28Q4G0W2 176 aa21.41■■□□□ 1.02
MSH5-207ENST00000425703 NOL8Q76FK4 1167 aaKnown RBP21.41■■□□□ 1.02
MSH5-207ENST00000425703 MYL10Q9BUA6 226 aa21.41■■□□□ 1.02
MSH5-207ENST00000425703 ZMYND8Q9ULU4 1186 aaPredicted RBP21.41■■□□□ 1.02
MSH5-207ENST00000425703 A0A1W2PPC1 479 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 MYADML2A6NDP7 307 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 BMP8BP34820 402 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 ADCK5Q3MIX3 580 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 GNASQ5JWF2 1037 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 TLK2Q86UE8 772 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 RRP36Q96EU6 259 aaKnown RBP21.4■■□□□ 1.02
MSH5-207ENST00000425703 RMDN3Q96TC7 470 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 GDF15Q99988 308 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 AP5M1Q9H0R1 490 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 COL20A1Q9P218 1284 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 LRRC37A2A6NM11 1700 aa21.4■■□□□ 1.02
MSH5-207ENST00000425703 RANBP2P49792 3224 aaKnown RBP21.39■■□□□ 1.02
MSH5-207ENST00000425703 CFBP00751 764 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 SYNE3Q6ZMZ3 975 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 FANCBQ8NB91 859 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 SCFD2Q8WU76 684 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 GLT1D1Q96MS3 346 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 TAAR1Q96RJ0 339 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 LRRC2Q9BYS8 371 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 WDR11Q9BZH6 1224 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 STARD7Q9NQZ5 370 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 ATP11BQ9Y2G3 1177 aa21.39■■□□□ 1.01
MSH5-207ENST00000425703 NKRFO15226 690 aaKnown RBP eCLIP21.38■■□□□ 1.01
MSH5-207ENST00000425703 ZEB2O60315 1214 aa21.38■■□□□ 1.01
MSH5-207ENST00000425703 ASGR1P07306 291 aa21.38■■□□□ 1.01
MSH5-207ENST00000425703 SYN1P17600 705 aa21.38■■□□□ 1.01
MSH5-207ENST00000425703 RCAN1P53805 252 aa21.38■■□□□ 1.01
MSH5-207ENST00000425703 FSCN1Q16658 493 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms