RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 DNERQ8NFT8 737 aa20.81■□□□□ 0.92
IGHV3-47-201ENST00000425060 SYTL5Q8TDW5 730 aaPredicted RBP20.81■□□□□ 0.92
IGHV3-47-201ENST00000425060 NUP133Q8WUM0 1156 aa20.81■□□□□ 0.92
IGHV3-47-201ENST00000425060 UPF3AQ9H1J1 476 aaKnown RBP20.81■□□□□ 0.92
IGHV3-47-201ENST00000425060 PDGFCQ9NRA1 345 aa20.81■□□□□ 0.92
IGHV3-47-201ENST00000425060 PHF24Q9UPV7 400 aa20.81■□□□□ 0.92
IGHV3-47-201ENST00000425060 BAZ2BQ9UIF8 2168 aaKnown RBP20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 CCDC69A6NI79 296 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 SMARCA1P28370 1054 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 GJA9P57773 515 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 KRT32Q14532 448 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 MCF2L2Q86YR7 1114 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 VTA1Q9NP79 307 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 COL20A1Q9P218 1284 aa20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 GNEQ9Y223 722 aaKnown RBP20.8■□□□□ 0.92
IGHV3-47-201ENST00000425060 PNMA6FA0A0J9YX94 578 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 MYADML2A6NDP7 307 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 CTAGE5O15320 804 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 EPB41L2O43491 1005 aaKnown RBP20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 IRX5P78411 483 aaPredicted RBP20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 IQSEC1Q6DN90 963 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 SLC39A5Q6ZMH5 540 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 NFXL1Q6ZNB6 911 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 EEPD1Q7L9B9 569 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 FBXO16Q8IX29 292 aaPredicted RBP20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 C7orf61Q8IZ16 206 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 CTCFLQ8NI51 663 aaPredicted RBP20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 TSEN34Q9BSV6 310 aaKnown RBP20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 SPZ1Q9BXG8 430 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 PCDHA1Q9Y5I3 950 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 SNX14Q9Y5W7 946 aa20.79■□□□□ 0.92
IGHV3-47-201ENST00000425060 RBM47A0AV96 593 aaKnown RBP20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 REC8O95072 547 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 MYCNP04198 464 aaPredicted RBP20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 SMPD1P17405 629 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 KIF5BP33176 963 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 ATN1P54259 1190 aaPredicted RBP20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 SNX17Q15036 470 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 HOMER1Q86YM7 354 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 TCEANC2Q96MN5 208 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 TAAR1Q96RJ0 339 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 LZTS2Q9BRK4 669 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 PRO3102Q9H379 93 aa20.78■□□□□ 0.92
IGHV3-47-201ENST00000425060 PLEKHA8P1O95397 391 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 CALM1P0DP23 149 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 CALM2P0DP24 149 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 CALM3P0DP25 149 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 RXRAP19793 462 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 HSD17B4P51659 736 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 C1orf53Q5VUE5 145 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 SRBD1Q8N5C6 995 aaKnown RBP20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 FERMT2Q96AC1 680 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 MAP3K20Q9NYL2 800 aaKnown RBP20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 COLQQ9Y215 455 aaPredicted RBP20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 SLC12A7Q9Y666 1083 aa20.77■□□□□ 0.92
IGHV3-47-201ENST00000425060 DNAH12Q6ZR08 3092 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 HMGB1P09429 215 aaKnown RBP20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 PTGS1P23219 599 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 GNAQP50148 359 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 TRAF1Q13077 416 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 KCNA10Q16322 511 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 SAMD3Q8N6K7 520 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 FANCBQ8NB91 859 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 BRPF3Q9ULD4 1205 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 ZMYND8Q9ULU4 1186 aaPredicted RBP20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 Q9Y3F1 56 aa20.76■□□□□ 0.91
IGHV3-47-201ENST00000425060 A0A1W2PQ45 241 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 A0A1W2PQY0 241 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 MOXD2PA6NHM9 499 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 CFBP00751 764 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 ACLYP53396 1101 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 RTP1P59025 263 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 PDE4DQ08499 809 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 DUSP28Q4G0W2 176 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 APOA5Q6Q788 366 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 RAB11FIP4Q86YS3 637 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 NSUN6Q8TEA1 469 aaKnown RBP20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 USP26Q9BXU7 913 aa20.75■□□□□ 0.91
IGHV3-47-201ENST00000425060 CPA1P15085 419 aa20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 CHRDL2Q6WN34 429 aa20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 TMTC3Q6ZXV5 915 aa20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 PCSK9Q8NBP7 692 aaKnown RBP20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 RMDN3Q96TC7 470 aa20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 MPHOSPH6Q99547 160 aaKnown RBP20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 SPC25Q9HBM1 224 aa20.74■□□□□ 0.91
IGHV3-47-201ENST00000425060 B4DLN1 442 aa20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 DYNC1LI2O43237 492 aaPredicted RBP20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 SYN1P17600 705 aa20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 GNASQ5JWF2 1037 aa20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 TLK2Q86UE8 772 aa20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 MICU3Q86XE3 530 aa20.73■□□□□ 0.91
IGHV3-47-201ENST00000425060 FBXL16Q8N461 479 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms