RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 ADGRG1Q9Y653 693 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 NRXN1Q9ULB1 1477 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 HOXA13P31271 388 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 TXNRD1Q16881 649 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 HAUS3Q68CZ6 603 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 PACSIN2Q9UNF0 486 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 MROH2AA6NES4 1674 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 ABCA9Q8IUA7 1624 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 NCK2O43639 380 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 TUBBP07437 444 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 NR2F2P24468 414 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 INPP5BP32019 993 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 CC2D1AQ6P1N0 951 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L6PQ6QN14 398 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 PROCA1Q8NCQ7 364 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 RIN2Q8WYP3 895 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC172P0C7W6 258 aa11.29□□□□□ -0.6
VPS37A-202ENST00000425020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC151A5D8V7 595 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 KRIT1O00522 736 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 PNMA8AQ86V59 439 aaPredicted RBP11.28□□□□□ -0.6
VPS37A-202ENST00000425020 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 ABHD10Q9NUJ1 306 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 SMARCAL1Q9NZC9 954 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 USP21Q9UK80 565 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 LMTK2Q8IWU2 1503 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 KIF4AO95239 1232 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 CTNNA1P35221 906 aaKnown RBP11.28□□□□□ -0.6
VPS37A-202ENST00000425020 UAP1Q16222 522 aaPredicted RBP11.28□□□□□ -0.6
VPS37A-202ENST00000425020 TBC1D9BQ66K14 1250 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 RAD9BQ6WBX8 426 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 TMC4Q7Z404 712 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 FAM84BQ96KN1 310 aaPredicted RBP11.28□□□□□ -0.6
VPS37A-202ENST00000425020 HYOU1Q9Y4L1 999 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 ZNF185O15231 689 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 CALCOCO2Q13137 446 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 PPP4R3AQ6IN85 833 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 CABS1Q96KC9 395 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 AP1M1Q9BXS5 423 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 ASIC3Q9UHC3 531 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
VPS37A-202ENST00000425020 CPDO75976 1380 aa11.27□□□□□ -0.6
VPS37A-202ENST00000425020 CDK8P49336 464 aa11.27□□□□□ -0.6
VPS37A-202ENST00000425020 SLFN13Q68D06 897 aa11.27□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC105Q8IYK2 499 aa11.27□□□□□ -0.6
VPS37A-202ENST00000425020 MB21D1Q8N884 522 aa11.27□□□□□ -0.6
VPS37A-202ENST00000425020 FLOT1O75955 427 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 KLRK1P26718 216 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 IFNAR2P48551 515 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 PAK2Q13177 524 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 NDST4Q9H3R1 872 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 PCIF1Q9H4Z3 704 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 RWDD2AQ9UIY3 292 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 GAS7O60861 476 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 HEXIM1O94992 359 aaKnown RBP11.27□□□□□ -0.61
VPS37A-202ENST00000425020 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.61
VPS37A-202ENST00000425020 CERKLQ49MI3 558 aaPredicted RBP11.27□□□□□ -0.61
VPS37A-202ENST00000425020 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 ANKRD42Q8N9B4 389 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 CCDC26Q8TAB7 109 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.61
VPS37A-202ENST00000425020 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
VPS37A-202ENST00000425020 CCNE1P24864 410 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 STAT1P42224 750 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 TUBB4BP68371 445 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 ICA1Q05084 483 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 AGPAT5Q9NUQ2 364 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 TDP2O95551 362 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 KIF11P52732 1056 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 VSNL1P62760 191 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 PPM1KQ8N3J5 372 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 ARFGAP2Q8N6H7 521 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 TC2NQ8N9U0 490 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS37A-202ENST00000425020 ALDH8A1Q9H2A2 487 aaPredicted RBP11.26□□□□□ -0.61
VPS37A-202ENST00000425020 RASAL2Q9UJF2 1139 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
VPS37A-202ENST00000425020 E9PMD0 336 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms