RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
DDR1-234ENST00000424544 B4E1Z4 1266 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 DYNC1LI2O43237 492 aaPredicted RBP18.95■□□□□ 0.62
DDR1-234ENST00000424544 CABYRO75952 493 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 GOLGA8HP0CJ92 632 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 GSPT1P15170 499 aaKnown RBP18.95■□□□□ 0.62
DDR1-234ENST00000424544 ALDH5A1P51649 535 aaPredicted RBP18.95■□□□□ 0.62
DDR1-234ENST00000424544 RPS6P62753 249 aaKnown RBP18.95■□□□□ 0.62
DDR1-234ENST00000424544 MFSD5Q6N075 450 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 CXCL17Q6UXB2 119 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 EEPD1Q7L9B9 569 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 TLK2Q86UE8 772 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 IQCA1Q86XH1 822 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 FBXO16Q8IX29 292 aaPredicted RBP18.95■□□□□ 0.62
DDR1-234ENST00000424544 ENAHQ8N8S7 591 aaPredicted RBP18.95■□□□□ 0.62
DDR1-234ENST00000424544 PNMA1Q8ND90 353 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 GUCD1Q96NT3 240 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 CTNNA3Q9UI47 895 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 EYSQ5T1H1 3165 aa18.95■□□□□ 0.62
DDR1-234ENST00000424544 FPGSQ05932 587 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 TTC22Q5TAA0 569 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 RNF207Q6ZRF8 634 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 KIAA1211Q6ZU35 1233 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 SEZ6LQ9BYH1 1024 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 UBA5Q9GZZ9 404 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 CPVLQ9H3G5 476 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 LRRC37A2A6NM11 1700 aa18.94■□□□□ 0.62
DDR1-234ENST00000424544 PTPDC1A2A3K4 754 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 IMMTQ16891 758 aaKnown RBP18.93■□□□□ 0.62
DDR1-234ENST00000424544 SLC30A10Q6XR72 485 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
DDR1-234ENST00000424544 DNERQ8NFT8 737 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 VTI1AQ96AJ9 217 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 KRT23Q9C075 422 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
DDR1-234ENST00000424544 CALML3P27482 149 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 ITGA7Q13683 1181 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 SEC23AQ15436 765 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 RASIP1Q5U651 963 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 ADGRF4Q8IZF3 695 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 TBC1D5Q92609 795 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 WDR11Q9BZH6 1224 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 AP5M1Q9H0R1 490 aa18.92■□□□□ 0.62
DDR1-234ENST00000424544 TTYH1Q9H313 450 aaPredicted RBP18.91■□□□□ 0.62
DDR1-234ENST00000424544 KAT14Q9H8E8 782 aa18.91■□□□□ 0.62
DDR1-234ENST00000424544 VCANP13611 3396 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 ZEB2O60315 1214 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 CHMLP26374 656 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 ASPRV1Q53RT3 343 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 TMEM240Q5SV17 173 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.9■□□□□ 0.629e-7■■■□□ 14.7
DDR1-234ENST00000424544 CNNM2Q9H8M5 875 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 JMJD4Q9H9V9 463 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 TNKSO95271 1327 aa18.9■□□□□ 0.62
DDR1-234ENST00000424544 PRUNE2Q8WUY3 3088 aa18.89■□□□□ 0.61
DDR1-234ENST00000424544 CDC37Q16543 378 aaPredicted RBP18.89■□□□□ 0.61
DDR1-234ENST00000424544 ZNF697Q5TEC3 545 aa18.89■□□□□ 0.61
DDR1-234ENST00000424544 CYB5R4Q7L1T6 521 aa18.89■□□□□ 0.61
DDR1-234ENST00000424544 MTMR8Q96EF0 704 aa18.89■□□□□ 0.61
DDR1-234ENST00000424544 RNPC3Q96LT9 517 aaKnown RBP18.89■□□□□ 0.61
DDR1-234ENST00000424544 RAD50Q92878 1312 aa18.89■□□□□ 0.61
DDR1-234ENST00000424544 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 A6NJR5 290 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 NKRFO15226 690 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDR1-234ENST00000424544 TLR3O15455 904 aaKnown RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 CYP21A2P08686 494 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 PARP1P09874 1014 aaKnown RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 CSF2RAP15509 400 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 PURAQ00577 322 aaKnown RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 GHRHRQ02643 423 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 PTH1RQ03431 593 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 PPIGQ13427 754 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 16.6
DDR1-234ENST00000424544 CCDC62Q6P9F0 684 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 SYTL5Q8TDW5 730 aaPredicted RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 VWCEQ96DN2 955 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 FAM161BQ96MY7 647 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 CDX2Q99626 313 aaPredicted RBP18.88■□□□□ 0.61
DDR1-234ENST00000424544 COL20A1Q9P218 1284 aa18.88■□□□□ 0.61
DDR1-234ENST00000424544 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 PALM3A6NDB9 673 aaPredicted RBP18.87■□□□□ 0.61
DDR1-234ENST00000424544 ABCB11O95342 1321 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 PSMC6P62333 389 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 QRICH1Q2TAL8 776 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 USH1GQ495M9 461 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 SCFD2Q8WU76 684 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 TAAR1Q96RJ0 339 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 TRPV6Q9H1D0 765 aa18.87■□□□□ 0.61
DDR1-234ENST00000424544 OPLAHO14841 1288 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 B4GALT4O60513 344 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 CYP2C18P33260 490 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 PDE4DQ08499 809 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 SLC35G1Q2M3R5 365 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 NOC4LQ9BVI4 516 aaKnown RBP18.86■□□□□ 0.61
DDR1-234ENST00000424544 PPP1R12CQ9BZL4 782 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 ALDH8A1Q9H2A2 487 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms