RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 CLK2P49760 499 aaKnown RBP18.25■□□□□ 0.51
ABCA1-203ENST00000423487 C1QTNF8P60827 252 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 GHRHRQ02643 423 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 AP3B2Q13367 1082 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 UBE2SQ16763 222 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 NCAPG2Q86XI2 1143 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 RASGRP4Q8TDF6 673 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 MROH8Q9H579 483 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 COL11A1P12107 1806 aaPredicted RBP18.25■□□□□ 0.51
ABCA1-203ENST00000423487 ADGRA2Q96PE1 1338 aa18.25■□□□□ 0.51
ABCA1-203ENST00000423487 CA12O43570 354 aa18.24■□□□□ 0.51
ABCA1-203ENST00000423487 TLR2O60603 784 aa18.24■□□□□ 0.51
ABCA1-203ENST00000423487 ERCC3P19447 782 aa18.24■□□□□ 0.51
ABCA1-203ENST00000423487 HSD17B4P51659 736 aa18.24■□□□□ 0.51
ABCA1-203ENST00000423487 NSMFQ6X4W1 530 aa18.24■□□□□ 0.51
ABCA1-203ENST00000423487 PIK3AP1Q6ZUJ8 805 aa18.24■□□□□ 0.51
ABCA1-203ENST00000423487 TNPO1Q92973 898 aaKnown RBP18.24■□□□□ 0.51
ABCA1-203ENST00000423487 SPDYE3A6NKU9 549 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
ABCA1-203ENST00000423487 NONOQ15233 471 aaKnown RBP eCLIP18.23■□□□□ 0.51
ABCA1-203ENST00000423487 MYSM1Q5VVJ2 828 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 RNF207Q6ZRF8 634 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
ABCA1-203ENST00000423487 TBC1D5Q92609 795 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 TMEM260Q9NX78 707 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 CPA4Q9UI42 421 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 NOL7Q9UMY1 257 aaKnown RBP18.23■□□□□ 0.51
ABCA1-203ENST00000423487 BCRP11274 1271 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 CRHR2Q13324 411 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
ABCA1-203ENST00000423487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.23■□□□□ 0.51
ABCA1-203ENST00000423487 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
ABCA1-203ENST00000423487 TRAPPC10P48553 1259 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
ABCA1-203ENST00000423487 FOXD4L6Q3SYB3 417 aaPredicted RBP18.22■□□□□ 0.51
ABCA1-203ENST00000423487 EARS2Q5JPH6 523 aaKnown RBP18.22■□□□□ 0.51
ABCA1-203ENST00000423487 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 FAM173BQ6P4H8 233 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 C17orf99Q6UX52 265 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 FOXD4L3Q6VB84 417 aaPredicted RBP18.22■□□□□ 0.51
ABCA1-203ENST00000423487 ANKRD35Q8N283 1001 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 ANO3Q9BYT9 981 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 EHMT1Q9H9B1 1298 aa18.22■□□□□ 0.51
ABCA1-203ENST00000423487 A1CFQ9NQ94 594 aaKnown RBP18.22■□□□□ 0.51
ABCA1-203ENST00000423487 PFASO15067 1338 aa18.21■□□□□ 0.51
ABCA1-203ENST00000423487 BAATQ14032 418 aaPredicted RBP18.21■□□□□ 0.51
ABCA1-203ENST00000423487 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
ABCA1-203ENST00000423487 WDR78Q5VTH9 848 aa18.21■□□□□ 0.51
ABCA1-203ENST00000423487 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
ABCA1-203ENST00000423487 SYTL5Q8TDW5 730 aaPredicted RBP18.21■□□□□ 0.51
ABCA1-203ENST00000423487 PORCNQ9H237 461 aa18.21■□□□□ 0.51
ABCA1-203ENST00000423487 SMCHD1A6NHR9 2005 aa18.21■□□□□ 0.51
ABCA1-203ENST00000423487 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 KCTD2Q14681 263 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 INF2Q27J81 1249 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 TBCKQ8TEA7 893 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 PGBD1Q96JS3 809 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 EFCC1Q9HA90 598 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 CYP39A1Q9NYL5 469 aa18.2■□□□□ 0.5
ABCA1-203ENST00000423487 FCER1AP12319 257 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 MAPK4P31152 587 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 KRT85P78386 507 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 DNM1Q05193 864 aaKnown RBP18.19■□□□□ 0.5
ABCA1-203ENST00000423487 NEK8Q86SG6 692 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 MMP19Q99542 508 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 CFHR5Q9BXR6 569 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 CFAP45Q9UL16 551 aa18.19■□□□□ 0.5
ABCA1-203ENST00000423487 STRNO43815 780 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 CLEC17AQ6ZS10 378 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 BAG4O95429 457 aaKnown RBP18.18■□□□□ 0.5
ABCA1-203ENST00000423487 NCLP19338 710 aaKnown RBP18.18■□□□□ 0.5
ABCA1-203ENST00000423487 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 SREBF1P36956 1147 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 TOB1P50616 345 aaPredicted RBP18.18■□□□□ 0.5
ABCA1-203ENST00000423487 TTC38Q5R3I4 469 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 ABRAQ8N0Z2 381 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 USP28Q96RU2 1077 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 NAP1L4Q99733 375 aaKnown RBP18.18■□□□□ 0.5
ABCA1-203ENST00000423487 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 COL20A1Q9P218 1284 aa18.18■□□□□ 0.5
ABCA1-203ENST00000423487 POTEB2H3BUK9 544 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 USP11P51784 963 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 ARHGAP4P98171 946 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 LETM2Q2VYF4 491 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 PLEKHH3Q7Z736 793 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 RMDN3Q96TC7 470 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 R3HDMLQ9H3Y0 253 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
ABCA1-203ENST00000423487 TFIP11Q9UBB9 837 aaKnown RBP18.17■□□□□ 0.5
ABCA1-203ENST00000423487 TRPA1O75762 1119 aa18.16■□□□□ 0.5
ABCA1-203ENST00000423487 ORC2Q13416 577 aaPredicted RBP18.16■□□□□ 0.5
ABCA1-203ENST00000423487 ARHGEF16Q5VV41 709 aa18.16■□□□□ 0.5
ABCA1-203ENST00000423487 ANO1Q5XXA6 986 aa18.16■□□□□ 0.5
ABCA1-203ENST00000423487 DNERQ8NFT8 737 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms