RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 EPB41L2O43491 1005 aaKnown RBP30.64■■■□□ 2.5
CDK9-202ENST00000421939 EVI5O60447 810 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 RXRAP19793 462 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 GNAQP50148 359 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 LZTS2Q9BRK4 669 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 SPZ1Q9BXG8 430 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 PCDHA1Q9Y5I3 950 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 NR2E3Q9Y5X4 410 aa30.64■■■□□ 2.5
CDK9-202ENST00000421939 DNAH12Q6ZR08 3092 aa30.63■■■□□ 2.49
CDK9-202ENST00000421939 H0YGN5 161 aa30.63■■■□□ 2.49
CDK9-202ENST00000421939 DUSP11O75319 330 aaKnown RBP30.63■■■□□ 2.49
CDK9-202ENST00000421939 TRAF1Q13077 416 aa30.63■■■□□ 2.49
CDK9-202ENST00000421939 RNF180Q86T96 592 aa30.63■■■□□ 2.49
CDK9-202ENST00000421939 FBXO16Q8IX29 292 aaPredicted RBP30.63■■■□□ 2.49
CDK9-202ENST00000421939 DNERQ8NFT8 737 aa30.63■■■□□ 2.49
CDK9-202ENST00000421939 JAKMIP1Q96N16 626 aaKnown RBP30.63■■■□□ 2.49
CDK9-202ENST00000421939 SENP6Q9GZR1 1112 aaPredicted RBP30.63■■■□□ 2.49
CDK9-202ENST00000421939 SYNRGQ9UMZ2 1314 aa30.63■■■□□ 2.49
CDK9-202ENST00000421939 ADCY6O43306 1168 aa30.62■■■□□ 2.49
CDK9-202ENST00000421939 ADAMTS4O75173 837 aa30.62■■■□□ 2.49
CDK9-202ENST00000421939 MICU3Q86XE3 530 aa30.62■■■□□ 2.49
CDK9-202ENST00000421939 RAB11FIP4Q86YS3 637 aa30.62■■■□□ 2.49
CDK9-202ENST00000421939 TBC1D5Q92609 795 aa30.62■■■□□ 2.49
CDK9-202ENST00000421939 VTA1Q9NP79 307 aa30.62■■■□□ 2.49
CDK9-202ENST00000421939 PNMA6FA0A0J9YX94 578 aa30.61■■■□□ 2.49
CDK9-202ENST00000421939 PLEKHA8P1O95397 391 aa30.61■■■□□ 2.49
CDK9-202ENST00000421939 APOA5Q6Q788 366 aa30.61■■■□□ 2.49
CDK9-202ENST00000421939 SYNE3Q6ZMZ3 975 aa30.61■■■□□ 2.49
CDK9-202ENST00000421939 EEPD1Q7L9B9 569 aa30.61■■■□□ 2.49
CDK9-202ENST00000421939 SYTL5Q8TDW5 730 aaPredicted RBP30.61■■■□□ 2.49
CDK9-202ENST00000421939 MPHOSPH6Q99547 160 aaKnown RBP30.61■■■□□ 2.49
CDK9-202ENST00000421939 OPLAHO14841 1288 aa30.6■■■□□ 2.49
CDK9-202ENST00000421939 SMARCA1P28370 1054 aa30.6■■■□□ 2.49
CDK9-202ENST00000421939 ADCYAP1R1P41586 468 aa30.6■■■□□ 2.49
CDK9-202ENST00000421939 PIBF1Q8WXW3 757 aa30.6■■■□□ 2.49
CDK9-202ENST00000421939 EDNRBP24530 442 aa30.59■■■□□ 2.49
CDK9-202ENST00000421939 LRRC26Q2I0M4 334 aa30.59■■■□□ 2.49
CDK9-202ENST00000421939 BLOC1S2Q6QNY1 142 aa30.59■■■□□ 2.49
CDK9-202ENST00000421939 C7orf61Q8IZ16 206 aa30.59■■■□□ 2.49
CDK9-202ENST00000421939 RRP36Q96EU6 259 aaKnown RBP30.59■■■□□ 2.49
CDK9-202ENST00000421939 COL20A1Q9P218 1284 aa30.59■■■□□ 2.49
CDK9-202ENST00000421939 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.58■■■□□ 2.49
CDK9-202ENST00000421939 CFBP00751 764 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 CPA1P15085 419 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 GHRHRQ02643 423 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 TNFAIP2Q03169 654 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 PDE4DQ08499 809 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 TAPT1Q6NXT6 567 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 SRBD1Q8N5C6 995 aaKnown RBP30.58■■■□□ 2.49
CDK9-202ENST00000421939 FANCBQ8NB91 859 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 UPF3AQ9H1J1 476 aaKnown RBP30.58■■■□□ 2.49
CDK9-202ENST00000421939 SPC25Q9HBM1 224 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 PDGFCQ9NRA1 345 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 PHF24Q9UPV7 400 aa30.58■■■□□ 2.49
CDK9-202ENST00000421939 B4DLN1 442 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 HSD17B4P51659 736 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 MRPL12P52815 198 aaKnown RBP30.57■■■□□ 2.48
CDK9-202ENST00000421939 FGD1P98174 961 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 TMTC3Q6ZXV5 915 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 NOL8Q76FK4 1167 aaKnown RBP30.57■■■□□ 2.48
CDK9-202ENST00000421939 KLHDC9Q8NEP7 349 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 USP26Q9BXU7 913 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 SEC63Q9UGP8 760 aaKnown RBP30.57■■■□□ 2.48
CDK9-202ENST00000421939 BRPF3Q9ULD4 1205 aa30.57■■■□□ 2.48
CDK9-202ENST00000421939 ZBTB43O43298 467 aa30.56■■■□□ 2.48
CDK9-202ENST00000421939 C6orf222P0C671 652 aaPredicted RBP30.56■■■□□ 2.48
CDK9-202ENST00000421939 PSMA5P28066 241 aa30.56■■■□□ 2.48
CDK9-202ENST00000421939 ATN1P54259 1190 aaPredicted RBP30.56■■■□□ 2.48
CDK9-202ENST00000421939 IQSEC1Q6DN90 963 aa30.56■■■□□ 2.48
CDK9-202ENST00000421939 NSUN6Q8TEA1 469 aaKnown RBP30.56■■■□□ 2.48
CDK9-202ENST00000421939 TAAR1Q96RJ0 339 aa30.56■■■□□ 2.48
CDK9-202ENST00000421939 KLF18A0A0U1RQI7 1052 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 MYADML2A6NDP7 307 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 SMPD1P17405 629 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 CST5P28325 142 aaPredicted RBP30.55■■■□□ 2.48
CDK9-202ENST00000421939 GJA9P57773 515 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 CMTR1Q8N1G2 835 aaKnown RBP30.55■■■□□ 2.48
CDK9-202ENST00000421939 SAMD3Q8N6K7 520 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 FERMT2Q96AC1 680 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 RMDN3Q96TC7 470 aa30.55■■■□□ 2.48
CDK9-202ENST00000421939 TSEN34Q9BSV6 310 aaKnown RBP30.55■■■□□ 2.48
CDK9-202ENST00000421939 MAP3K20Q9NYL2 800 aaKnown RBP30.55■■■□□ 2.48
CDK9-202ENST00000421939 GNEQ9Y223 722 aaKnown RBP30.55■■■□□ 2.48
CDK9-202ENST00000421939 CASTP20810 708 aaKnown RBP30.54■■■□□ 2.48
CDK9-202ENST00000421939 RPS6KB1P23443 525 aa30.54■■■□□ 2.48
CDK9-202ENST00000421939 Q6ZUG5 572 aa30.54■■■□□ 2.48
CDK9-202ENST00000421939 TLK2Q86UE8 772 aa30.54■■■□□ 2.48
CDK9-202ENST00000421939 RBM28Q9NW13 759 aaKnown RBP30.54■■■□□ 2.48
CDK9-202ENST00000421939 RTN1Q16799 776 aa30.53■■■□□ 2.48
CDK9-202ENST00000421939 A0A1W2PQ45 241 aaPredicted RBP30.52■■■□□ 2.48
CDK9-202ENST00000421939 A0A1W2PQY0 241 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 RBM47A0AV96 593 aaKnown RBP30.52■■■□□ 2.48
CDK9-202ENST00000421939 MOXD2PA6NHM9 499 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 GCOM1H8Y6P7 765 aaPredicted RBP30.52■■■□□ 2.48
CDK9-202ENST00000421939 POLR2MP0CAP2 368 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 ACLYP53396 1101 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 RCAN1P53805 252 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 NKX3-2P78367 333 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 IRX5P78411 483 aaPredicted RBP30.52■■■□□ 2.48
CDK9-202ENST00000421939 ARHGEF16Q5VV41 709 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms