RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 A1BGP04217 495 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.26
CLCN4-203ENST00000421085 PPWD1Q96BP3 646 aaKnown RBP13.46□□□□□ -0.26
CLCN4-203ENST00000421085 PDCLQ13371 301 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 PANX2Q96RD6 677 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 C1orf112Q9NSG2 853 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 RNF14Q9UBS8 474 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.26
CLCN4-203ENST00000421085 GRIN2AQ12879 1464 aa13.46□□□□□ -0.26
CLCN4-203ENST00000421085 SGK1O00141 431 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 CHUKO15111 745 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 HAUS1Q96CS2 278 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 GINS2Q9Y248 185 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 USP17L21D6R901 530 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 WDR46O15213 610 aaKnown RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 LINC00301Q8NCQ3 95 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 SEPT10Q9P0V9 454 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 EPS15L1Q9UBC2 864 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 RCOR1Q9UKL0 485 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 TNRQ92752 1358 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 YWHAEP62258 255 aaKnown RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 IWS1Q96ST2 819 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 EYA3Q99504 573 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 ANGPTL2Q9UKU9 493 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 K7ENM7 598 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 DDB1Q16531 1140 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 ARPP21Q9UBL0 812 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 NFU1Q9UMS0 254 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 GARSP41250 739 aaKnown RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 TRIM50Q86XT4 487 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 P2RX5Q93086 422 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 SAAL1Q96ER3 474 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 DHTKD1Q96HY7 919 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-203ENST00000421085 STAP2Q9UGK3 403 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 PCDHA13Q9Y5I0 950 aa13.45□□□□□ -0.26
CLCN4-203ENST00000421085 RASGRF2O14827 1237 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 ECEL1O95672 775 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 IL1RL1Q01638 556 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 ZNF658Q5TYW1 1059 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 OTUD6AQ7L8S5 288 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 PBKQ96KB5 322 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 TUBB6Q9BUF5 446 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 DDX25Q9UHL0 483 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 ANAPC5Q9UJX4 755 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 TRPM2O94759 1503 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 MRPS25P82663 173 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 LMNB2Q03252 620 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 KMT5BQ4FZB7 885 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 SGO2Q562F6 1265 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 ENOX1Q8TC92 643 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 CCHCR1Q8TD31 782 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 ELAC2Q9BQ52 826 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 CENPKQ9BS16 269 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 WDR7Q9Y4E6 1490 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 KDRP35968 1356 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 FOXP1Q9H334 677 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 SYCP2Q9BX26 1530 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 NOP56O00567 594 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 GPC4O75487 556 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 ATP1A3P13637 1013 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 CDKL2Q92772 493 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 GJA10Q969M2 543 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 YIPF3Q9GZM5 350 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 FRMPD2Q68DX3 1309 aaPredicted RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
CLCN4-203ENST00000421085 INPP1P49441 399 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 PDE1BQ01064 536 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 AP1M1Q9BXS5 423 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 PLAAQ9Y263 795 aa13.44□□□□□ -0.26
CLCN4-203ENST00000421085 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
CLCN4-203ENST00000421085 NSFP46459 744 aaKnown RBP13.43□□□□□ -0.26
CLCN4-203ENST00000421085 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 SLC52A2Q9HAB3 445 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 MYL7Q01449 175 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 TOGARAM2Q6ZUX3 1019 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 TRIM42Q8IWZ5 723 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 BAG5Q9UL15 447 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 H7C0C1 242 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 TADA3O75528 432 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 P4HA1P13674 534 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 MSH2P43246 934 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 ATP5OP48047 213 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms