RNA–Protein interactions for RNA: ENST00000420246.6

TP53-204, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-204ENST00000420246 UBE2SQ16763 222 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 P2RX5Q93086 422 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 CALML4Q96GE6 196 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 ZSWIM4Q9H7M6 989 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
TP53-204ENST00000420246 TNNI2P48788 182 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 GRB10Q13322 594 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
TP53-204ENST00000420246 KCTD1Q719H9 257 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 TUBGCP2Q9BSJ2 902 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 BLOC1S4Q9NUP1 217 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
TP53-204ENST00000420246 CCNE1P24864 410 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 CACNB3P54284 484 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 MCM6Q14566 821 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
TP53-204ENST00000420246 KIAA0895Q8NCT3 520 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 GJA10Q969M2 543 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 PNMA5Q96PV4 448 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 PCDHAC2Q9Y5I4 1007 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 USP17L10C9JJH3 530 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 G3V3G9 751 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 hCG_1984214I3L0E3 225 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 AMPD3Q01432 767 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 DYMQ7RTS9 669 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 KRT222Q8N1A0 295 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 SLC35F6Q8N357 371 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
TP53-204ENST00000420246 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 CCDC47Q96A33 483 aaKnown RBP13.4□□□□□ -0.26
TP53-204ENST00000420246 FAM53CQ9NYF3 392 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
TP53-204ENST00000420246 MYH8P13535 1937 aa13.4□□□□□ -0.26
TP53-204ENST00000420246 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 A0A1W2PQC6 194 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 MYMKA6NI61 221 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 RAD21O60216 631 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 ARHGAP25P42331 645 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 KLK7P49862 253 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 RSRC2Q7L4I2 434 aaKnown RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 NPR1P16066 1061 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
TP53-204ENST00000420246 TCP10Q12799 353 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 REXO2Q9Y3B8 237 aaKnown RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 FHOD1Q9Y613 1164 aa13.39□□□□□ -0.27
TP53-204ENST00000420246 EPN1Q9Y6I3 576 aaPredicted RBP13.39□□□□□ -0.27
TP53-204ENST00000420246 BICDL2A1A5D9 508 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 SEC31AO94979 1220 aaKnown RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 NDUFA10O95299 355 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 DNM2P50570 870 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 TBC1D8BQ0IIM8 1120 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 KIF4BQ2VIQ3 1234 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 RIC8AQ9NPQ8 531 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 TRIM10Q9UDY6 481 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 PUF60Q9UHX1 559 aaKnown RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 CAPN11Q9UMQ6 739 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 RASSF10A6NK89 507 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 TMEM266Q2M3C6 531 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 TMCO3Q6UWJ1 677 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 HHIPL2Q6UWX4 724 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 SNX29Q8TEQ0 813 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 DNAJC7Q99615 494 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
TP53-204ENST00000420246 DNAJC18Q9H819 358 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 TFR2Q9UP52 801 aa13.38□□□□□ -0.27
TP53-204ENST00000420246 LRRC37AA6NMS7 1700 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms