RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 TBC1D5Q92609 795 aa23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 TINF2Q9BSI4 451 aa23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 UNC93B1Q9H1C4 597 aa23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 SLKQ9H2G2 1235 aaPredicted RBP23.84■■□□□ 1.41
HMGXB4-203ENST00000420166 CCDC85CA6NKD9 419 aa23.83■■□□□ 1.41
HMGXB4-203ENST00000420166 PFKFB2O60825 505 aa23.83■■□□□ 1.41
HMGXB4-203ENST00000420166 CCL5P13501 91 aa23.83■■□□□ 1.41
HMGXB4-203ENST00000420166 GHRHRQ02643 423 aa23.83■■□□□ 1.41
HMGXB4-203ENST00000420166 MAMDC4Q6UXC1 1216 aa23.83■■□□□ 1.41
HMGXB4-203ENST00000420166 PURBQ96QR8 312 aaKnown RBP23.83■■□□□ 1.41
HMGXB4-203ENST00000420166 ASTN1O14525 1302 aa23.83■■□□□ 1.4
HMGXB4-203ENST00000420166 RPTORQ8N122 1335 aa23.83■■□□□ 1.4
HMGXB4-203ENST00000420166 SYNGAP1Q96PV0 1343 aa23.83■■□□□ 1.4
HMGXB4-203ENST00000420166 CPLX1O14810 134 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 CFBP00751 764 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 HSD17B4P51659 736 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 SCRN1Q12765 414 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 HEATR3Q7Z4Q2 680 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 SAMD3Q8N6K7 520 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 GPKOWQ92917 476 aaPredicted RBP eCLIP23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 PHKBQ93100 1093 aa23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 RBM27Q9P2N5 1060 aaKnown RBP23.82■■□□□ 1.4
HMGXB4-203ENST00000420166 PRPF3O43395 683 aaKnown RBP23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 LARGE1O95461 756 aa23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 CYBAP13498 195 aa23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 WWC2Q6AWC2 1192 aa23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 CPLX2Q6PUV4 134 aaKnown RBP23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 SYTL5Q8TDW5 730 aaPredicted RBP23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 RNF26Q9BY78 433 aaPredicted RBP23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 RNF208Q9H0X6 261 aa23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 HMX1Q9NP08 348 aaPredicted RBP23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 ADD3Q9UEY8 706 aaKnown RBP23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 LRRC37A2A6NM11 1700 aa23.81■■□□□ 1.4
HMGXB4-203ENST00000420166 ASB14A6NK59 587 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 hCG_1984214I3L0E3 225 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 ME3Q16798 604 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 PFKFB3Q16875 520 aaPredicted RBP23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 ARMCX2Q7L311 632 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 ZNF713Q8N859 430 aaPredicted RBP23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 TRPV1Q8NER1 839 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 SLC26A6Q9BXS9 759 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 MAP3K20Q9NYL2 800 aaKnown RBP23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 COL20A1Q9P218 1284 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 NRBP1Q9UHY1 535 aa23.8■■□□□ 1.4
HMGXB4-203ENST00000420166 LOC102724159A0A0B4J2E5 919 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 SNAI1O95863 264 aaPredicted RBP23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 SCG2P13521 617 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 ALDH5A1P51649 535 aaPredicted RBP23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 AKAP17AQ02040 695 aaKnown RBP23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 PWP2Q15269 919 aaKnown RBP23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 IL27Q8NEV9 243 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 DNERQ8NFT8 737 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 TMEM106CQ9BVX2 250 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 PAK6Q9NQU5 681 aaPredicted RBP23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 LIMCH1Q9UPQ0 1083 aa23.79■■□□□ 1.4
HMGXB4-203ENST00000420166 GCOM1H8Y6P7 765 aaPredicted RBP23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 STXBP3O00186 592 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 POLR2MP0CAP2 368 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 CCND3P30281 292 aaPredicted RBP23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 HOXA13P31271 388 aaPredicted RBP23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 PKN1Q16512 942 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 PPP1R18Q6NYC8 613 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 TRIM22Q8IYM9 498 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 NECAB1Q8N987 351 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 GTF3C6Q969F1 213 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 BARHL2Q9NY43 387 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 CNPY2Q9Y2B0 182 aa23.78■■□□□ 1.4
HMGXB4-203ENST00000420166 FRMPD3Q5JV73 1810 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 ST18O60284 1047 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 CDKL5O76039 1030 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 GJB1P08034 283 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 NAPAP54920 295 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 SSRP1Q08945 709 aaKnown RBP23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 PRAMEF19Q5SWL8 479 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 TYW1BQ6NUM6 668 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 MORC4Q8TE76 937 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 TAAR1Q96RJ0 339 aa23.77■■□□□ 1.4
HMGXB4-203ENST00000420166 SOX10P56693 466 aa23.76■■□□□ 1.39
HMGXB4-203ENST00000420166 NSUN6Q8TEA1 469 aaKnown RBP23.76■■□□□ 1.39
HMGXB4-203ENST00000420166 ABHD16BQ9H3Z7 469 aa23.76■■□□□ 1.39
HMGXB4-203ENST00000420166 PSTPIP2Q9H939 334 aa23.76■■□□□ 1.39
HMGXB4-203ENST00000420166 DDX49Q9Y6V7 483 aaKnown RBP23.76■■□□□ 1.39
HMGXB4-203ENST00000420166 POTEFA5A3E0 1075 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 PIK3CDO00329 1044 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 MEIS2O14770 477 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 ZNF865P0CJ78 1059 aaPredicted RBP23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 EDNRBP24530 442 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 CNGA1P29973 690 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 CUL5Q93034 780 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 ZSCAN31Q96LW9 406 aaPredicted RBP23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 DEFB118Q96PH6 123 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 RMDN3Q96TC7 470 aa23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 ZHX1Q9UKY1 873 aaPredicted RBP23.75■■□□□ 1.39
HMGXB4-203ENST00000420166 B4DLN1 442 aa23.74■■□□□ 1.39
HMGXB4-203ENST00000420166 CTDNEP1O95476 244 aa23.74■■□□□ 1.39
HMGXB4-203ENST00000420166 MRPL12P52815 198 aaKnown RBP23.74■■□□□ 1.39
HMGXB4-203ENST00000420166 ACVR2BQ13705 512 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms