RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PTGS1P23219 599 aa20.31■□□□□ 0.84
PTCD1-202ENST00000419981 ITGA7Q13683 1181 aa20.31■□□□□ 0.84
PTCD1-202ENST00000419981 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.31■□□□□ 0.84
PTCD1-202ENST00000419981 SLC43A3Q8NBI5 491 aa20.31■□□□□ 0.84
PTCD1-202ENST00000419981 SEZ6LQ9BYH1 1024 aa20.31■□□□□ 0.84
PTCD1-202ENST00000419981 UNC80Q8N2C7 3258 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 ZNF213O14771 459 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 IGHDP01880 384 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 SNHG28P0DPA3 235 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 NUCB1Q02818 461 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 DUSP28Q4G0W2 176 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 CWC27Q6UX04 472 aaKnown RBP20.3■□□□□ 0.84
PTCD1-202ENST00000419981 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 MYLIPQ8WY64 445 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 DIAPH3Q9NSV4 1193 aa20.3■□□□□ 0.84
PTCD1-202ENST00000419981 WDR19Q8NEZ3 1342 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 DNAJB2P25686 324 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 CALML3P27482 149 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 NT5C2P49902 561 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 TMEM240Q5SV17 173 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 TMEM63BQ5T3F8 832 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 GPATCH4Q5T3I0 446 aaKnown RBP20.29■□□□□ 0.84
PTCD1-202ENST00000419981 PSRC1Q6PGN9 363 aaPredicted RBP20.29■□□□□ 0.84
PTCD1-202ENST00000419981 RNF207Q6ZRF8 634 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 MAFAQ8NHW3 353 aaPredicted RBP20.29■□□□□ 0.84
PTCD1-202ENST00000419981 CLEC4DQ8WXI8 215 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 MPHOSPH6Q99547 160 aaKnown RBP20.29■□□□□ 0.84
PTCD1-202ENST00000419981 ZKSCAN3Q9BRR0 538 aa20.29■□□□□ 0.84
PTCD1-202ENST00000419981 HIP1O00291 1037 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 FOSL2P15408 326 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 CYP2C18P33260 490 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 C16orf59Q7L2K0 433 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 IQCA1Q86XH1 822 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 DGKHQ86XP1 1220 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 WDR11Q9BZH6 1224 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 HIPK3Q9H422 1215 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 EYSQ5T1H1 3165 aa20.28■□□□□ 0.84
PTCD1-202ENST00000419981 GRIN2DO15399 1336 aa20.27■□□□□ 0.84
PTCD1-202ENST00000419981 ACRP10323 421 aa20.27■□□□□ 0.84
PTCD1-202ENST00000419981 PSMC6P62333 389 aa20.27■□□□□ 0.84
PTCD1-202ENST00000419981 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
PTCD1-202ENST00000419981 CCDC178Q5BJE1 867 aa20.27■□□□□ 0.84
PTCD1-202ENST00000419981 EXOC6Q8TAG9 804 aa20.27■□□□□ 0.84
PTCD1-202ENST00000419981 CDH23Q9H251 3354 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 RBM47A0AV96 593 aaKnown RBP20.26■□□□□ 0.83
PTCD1-202ENST00000419981 B4GALT4O60513 344 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 KDM4AO75164 1064 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 GOLGA8HP0CJ92 632 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 PDE4DQ08499 809 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 USH1GQ495M9 461 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 RASIP1Q5U651 963 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 ZNF365Q70YC5 407 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 DNERQ8NFT8 737 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 DSCC1Q9BVC3 393 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 IL23AQ9NPF7 189 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 POLR3EQ9NVU0 708 aa20.26■□□□□ 0.83
PTCD1-202ENST00000419981 A0A0C4DFX4 3053 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 B4DLN1 442 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 B4E1Z4 1266 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 CPT1AP50416 773 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 MRPL12P52815 198 aaKnown RBP20.25■□□□□ 0.83
PTCD1-202ENST00000419981 OR6J1Q8NGC5 347 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 TIFAQ96CG3 184 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 TRPV6Q9H1D0 765 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 KAT14Q9H8E8 782 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 UMODL1Q5DID0 1318 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 RAD50Q92878 1312 aa20.25■□□□□ 0.83
PTCD1-202ENST00000419981 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
PTCD1-202ENST00000419981 NKRFO15226 690 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTCD1-202ENST00000419981 PURAQ00577 322 aaKnown RBP20.24■□□□□ 0.83
PTCD1-202ENST00000419981 PPP2R5BQ15173 497 aa20.24■□□□□ 0.83
PTCD1-202ENST00000419981 IMMTQ16891 758 aaKnown RBP20.24■□□□□ 0.83
PTCD1-202ENST00000419981 NOC4LQ9BVI4 516 aaKnown RBP20.24■□□□□ 0.83
PTCD1-202ENST00000419981 UBA5Q9GZZ9 404 aa20.24■□□□□ 0.83
PTCD1-202ENST00000419981 MTIF3Q9H2K0 278 aaKnown RBP20.24■□□□□ 0.83
PTCD1-202ENST00000419981 CPVLQ9H3G5 476 aa20.24■□□□□ 0.83
PTCD1-202ENST00000419981 ZNF576Q9H609 170 aa20.24■□□□□ 0.83
PTCD1-202ENST00000419981 PTPRSQ13332 1948 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 MYL3P08590 195 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 EDNRBP24530 442 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 GRIN2CQ14957 1233 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 CDC37Q16543 378 aaPredicted RBP20.23■□□□□ 0.83
PTCD1-202ENST00000419981 ASPRV1Q53RT3 343 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 BRDTQ58F21 947 aaPredicted RBP20.23■□□□□ 0.83
PTCD1-202ENST00000419981 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 ZSCAN10Q96SZ4 725 aaPredicted RBP20.23■□□□□ 0.83
PTCD1-202ENST00000419981 COL25A1Q9BXS0 654 aaPredicted RBP20.23■□□□□ 0.83
PTCD1-202ENST00000419981 PBX4Q9BYU1 374 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 ALDH8A1Q9H2A2 487 aaPredicted RBP20.23■□□□□ 0.83
PTCD1-202ENST00000419981 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
PTCD1-202ENST00000419981 CTNNA3Q9UI47 895 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 TNKSO95271 1327 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 ABCB11O95342 1321 aa20.23■□□□□ 0.83
PTCD1-202ENST00000419981 GRXCR1A8MXD5 290 aa20.22■□□□□ 0.83
PTCD1-202ENST00000419981 FGBP02675 491 aa20.22■□□□□ 0.83
PTCD1-202ENST00000419981 CCL23P55773 120 aa20.22■□□□□ 0.83
PTCD1-202ENST00000419981 ENAHQ8N8S7 591 aaPredicted RBP20.22■□□□□ 0.83
PTCD1-202ENST00000419981 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms