RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 NEDD9Q14511 834 aa12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 ZRSR2Q15696 482 aaKnown RBP12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 SBK1Q52WX2 424 aa12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 FAM26FQ5R3K3 315 aa12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 CCDC84Q86UT8 332 aaPredicted RBP12.51□□□□□ -0.41
SHROOM2-202ENST00000418909 BRD1O95696 1058 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 ZSCAN30Q86W11 494 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 FAM167AQ96KS9 214 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 CLSTN2Q9H4D0 955 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 NUB1Q9Y5A7 615 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 TACC1O75410 805 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 LMAN1P49257 510 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 MTMR2Q13614 643 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 Q3C1V9 767 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 EP400NLQ6ZTU2 488 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 GPR75-ASB3A0A0A6YYF3 556 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 CCL15-CCL14A0A0B4J2E2 113 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 KRT86O43790 486 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 DTNBO60941 627 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 BCRP11274 1271 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 CMA1P23946 247 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 CCL15Q16663 113 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 SERTAD1Q9UHV2 236 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
SHROOM2-202ENST00000418909 EIF3JO75822 258 aaKnown RBP12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 MMP1P03956 469 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 MCM3P25205 808 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 SELENOOQ9BVL4 669 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 PANK4Q9NVE7 773 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 TRIM14Q14142 442 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 UBE2SQ16763 222 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 CNPY4Q8N129 248 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 RNF34Q969K3 372 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 ARHGEF37A1IGU5 675 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 ESPNB1AK53 854 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 GAP43P17677 238 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 JAK3P52333 1124 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
SHROOM2-202ENST00000418909 PABPN1LA6NDY0 278 aaKnown RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 LIN9Q5TKA1 542 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 VPS16Q9H269 839 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 N4BP1O75113 896 aaKnown RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 PFKFB1P16118 471 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 CYP2J2P51589 502 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 MTMR1Q13613 665 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 GRM4Q14833 912 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 SLFNL1Q499Z3 407 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 MAP9Q49MG5 647 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 LARP4BQ92615 738 aaKnown RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 BLZF1Q9H2G9 400 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 METTL14Q9HCE5 456 aaKnown RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 PPP2R3BQ9Y5P8 575 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 COMMD10Q9Y6G5 202 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 GJC1P36383 396 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 PPP4CP60510 307 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 SNAP25P60880 206 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 QRICH1Q2TAL8 776 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 NUP58Q9BVL2 599 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 TMEM39BQ9GZU3 492 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 GBA2Q9HCG7 927 aaPredicted RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 STK17AQ9UEE5 414 aa12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 ARMCX3Q9UH62 379 aaPredicted RBP12.48□□□□□ -0.41
SHROOM2-202ENST00000418909 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 MYL3P08590 195 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 RFX5P48382 616 aaPredicted RBP12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 GNG11P61952 73 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 KRT76Q01546 638 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
SHROOM2-202ENST00000418909 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms