RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 TMEM63BQ5T3F8 832 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 GPATCH4Q5T3I0 446 aaKnown RBP16.57■□□□□ 0.24
LINC01006-202ENST00000418309 FAM126BQ8IXS8 530 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 MPHOSPH6Q99547 160 aaKnown RBP16.57■□□□□ 0.24
LINC01006-202ENST00000418309 PPP1R12CQ9BZL4 782 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 SEMA6BQ9H3T3 888 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 KAT14Q9H8E8 782 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 Q9Y3F1 56 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
LINC01006-202ENST00000418309 LCTP09848 1927 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 SNHG28P0DPA3 235 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 PDE4DQ08499 809 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 PPIGQ13427 754 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC01006-202ENST00000418309 ITGA7Q13683 1181 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 USH1GQ495M9 461 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 TMEM199Q8N511 208 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 PNMA1Q8ND90 353 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 CLEC4DQ8WXI8 215 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 COL6A3P12111 3177 aa16.56■□□□□ 0.24
LINC01006-202ENST00000418309 WDR19Q8NEZ3 1342 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 LOC102724159A0A0B4J2E5 919 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 CSF2RAP15509 400 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 NT5C2P49902 561 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 RPS6P62753 249 aaKnown RBP16.55■□□□□ 0.24
LINC01006-202ENST00000418309 PWP2Q15269 919 aaKnown RBP16.55■□□□□ 0.24
LINC01006-202ENST00000418309 DUSP28Q4G0W2 176 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 POTEHQ6S545 545 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 ZSCAN10Q96SZ4 725 aaPredicted RBP16.55■□□□□ 0.24
LINC01006-202ENST00000418309 CDX2Q99626 313 aaPredicted RBP16.55■□□□□ 0.24
LINC01006-202ENST00000418309 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC01006-202ENST00000418309 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 LRRC37A2A6NM11 1700 aa16.55■□□□□ 0.24
LINC01006-202ENST00000418309 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.54■□□□□ 0.24
LINC01006-202ENST00000418309 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.54■□□□□ 0.24
LINC01006-202ENST00000418309 B4DLN1 442 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 DHX16O60231 1041 aaKnown RBP16.54■□□□□ 0.24
LINC01006-202ENST00000418309 CD4P01730 458 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 ACRP10323 421 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 CYP2C18P33260 490 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 MRPL12P52815 198 aaKnown RBP16.54■□□□□ 0.24
LINC01006-202ENST00000418309 PSMC6P62333 389 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 SLC43A3Q8NBI5 491 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 KRT23Q9C075 422 aa16.54■□□□□ 0.24
LINC01006-202ENST00000418309 MYL3P08590 195 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 CDC37Q16543 378 aaPredicted RBP16.53■□□□□ 0.24
LINC01006-202ENST00000418309 TMEM240Q5SV17 173 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 ENAHQ8N8S7 591 aaPredicted RBP16.53■□□□□ 0.24
LINC01006-202ENST00000418309 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 OR6J1Q8NGC5 347 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 UBAC1Q9BSL1 405 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 TTYH1Q9H313 450 aaPredicted RBP16.53■□□□□ 0.24
LINC01006-202ENST00000418309 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
LINC01006-202ENST00000418309 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 LAMA4Q16363 1823 aa16.53■□□□□ 0.24
LINC01006-202ENST00000418309 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 TNKSO95271 1327 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 PARP1P09874 1014 aaKnown RBP16.52■□□□□ 0.24
LINC01006-202ENST00000418309 CPT1AP50416 773 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 BRDTQ58F21 947 aaPredicted RBP16.52■□□□□ 0.24
LINC01006-202ENST00000418309 ZNF365Q70YC5 407 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 C16orf59Q7L2K0 433 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 MYLIPQ8WY64 445 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 ANKS1AQ92625 1134 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 TRPV6Q9H1D0 765 aa16.52■□□□□ 0.24
LINC01006-202ENST00000418309 LAMA2P24043 3122 aaKnown RBP16.52■□□□□ 0.24
LINC01006-202ENST00000418309 RBM47A0AV96 593 aaKnown RBP16.51■□□□□ 0.23
LINC01006-202ENST00000418309 B4GALT4O60513 344 aa16.51■□□□□ 0.23
LINC01006-202ENST00000418309 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
LINC01006-202ENST00000418309 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
LINC01006-202ENST00000418309 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
LINC01006-202ENST00000418309 RGS22Q8NE09 1264 aa16.51■□□□□ 0.23
LINC01006-202ENST00000418309 SCFD2Q8WU76 684 aa16.51■□□□□ 0.23
LINC01006-202ENST00000418309 ABCB11O95342 1321 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 RAD50Q92878 1312 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 TMEM265A0A087WTH1 108 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 NKRFO15226 690 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01006-202ENST00000418309 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
LINC01006-202ENST00000418309 DNAJB2P25686 324 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 PDE4AP27815 886 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 CCL23P55773 120 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 TTC22Q5TAA0 569 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 FBXO11Q86XK2 927 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 TBC1D5Q92609 795 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 IL23AQ9NPF7 189 aa16.5■□□□□ 0.23
LINC01006-202ENST00000418309 UMODL1Q5DID0 1318 aa16.49■□□□□ 0.23
LINC01006-202ENST00000418309 MYH6P13533 1939 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms