RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 NEMFO60524 1076 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
CALD1-204ENST00000417172 CFBP00751 764 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 CDC25AP30304 524 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 LONRF3Q496Y0 759 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 RNF214Q8ND24 703 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 GRPEL1Q9HAV7 217 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 SLC38A10Q9HBR0 1119 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 RBBP6Q7Z6E9 1792 aaKnown RBP19.29■□□□□ 0.68
CALD1-204ENST00000417172 LOC285556D6RIA3 1793 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 C19orf81C9J6K1 198 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 POLR2DO15514 142 aaKnown RBP19.29■□□□□ 0.68
CALD1-204ENST00000417172 ICAM1P05362 532 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 ZNF526Q8TF50 670 aaPredicted RBP19.29■□□□□ 0.68
CALD1-204ENST00000417172 UIMC1Q96RL1 719 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 HOMER2Q9NSB8 354 aa19.29■□□□□ 0.68
CALD1-204ENST00000417172 PP2D1A8MPX8 630 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 IRF6O14896 467 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 TREML2Q5T2D2 321 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 FCHSD1Q86WN1 690 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 GJA10Q969M2 543 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 SDF4Q9BRK5 362 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 TMOD4Q9NZQ9 345 aa19.28■□□□□ 0.68
CALD1-204ENST00000417172 ARL6IP4Q66PJ3 421 aaKnown RBP19.27■□□□□ 0.68
CALD1-204ENST00000417172 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
CALD1-204ENST00000417172 GLT8D2Q9H1C3 349 aa19.27■□□□□ 0.68
CALD1-204ENST00000417172 FAM13BQ9NYF5 915 aa19.27■□□□□ 0.68
CALD1-204ENST00000417172 VWA5AO00534 786 aa19.27■□□□□ 0.67
CALD1-204ENST00000417172 NFIBO00712 420 aa19.27■□□□□ 0.67
CALD1-204ENST00000417172 FOXN1O15353 648 aa19.27■□□□□ 0.67
CALD1-204ENST00000417172 OR52Z1P0C646 297 aa19.27■□□□□ 0.67
CALD1-204ENST00000417172 NMRK2Q9NPI5 230 aa19.27■□□□□ 0.67
CALD1-204ENST00000417172 XRCC6P12956 609 aaKnown RBP eCLIP19.26■□□□□ 0.67
CALD1-204ENST00000417172 ALAS1P13196 640 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 TYRO3Q06418 890 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 AP3B2Q13367 1082 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 MUM1L1Q5H9M0 696 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 DTHD1Q6ZMT9 781 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 SERTAD1Q9UHV2 236 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 MRPL11Q9Y3B7 192 aaKnown RBP19.26■□□□□ 0.67
CALD1-204ENST00000417172 ABCB11O95342 1321 aa19.26■□□□□ 0.67
CALD1-204ENST00000417172 SPDYE3A6NKU9 549 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 SH3D19Q5HYK7 790 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 CATSPERGQ6ZRH7 1159 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 GRAMD1CQ8IYS0 662 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 CRYGNQ8WXF5 182 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 CLEC4DQ8WXI8 215 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 DDX25Q9UHL0 483 aaKnown RBP19.25■□□□□ 0.67
CALD1-204ENST00000417172 PIK3CDO00329 1044 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 PEX10O60683 326 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 UBXN2AP68543 259 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 ARHGAP4P98171 946 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 CALCRLQ16602 461 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 KRBA2Q6ZNG9 492 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 DHX58Q96C10 678 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 MTMR9Q96QG7 549 aa19.25■□□□□ 0.67
CALD1-204ENST00000417172 SPDYE5A6NIY4 337 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 GCOM1H8Y6P7 765 aaPredicted RBP19.24■□□□□ 0.67
CALD1-204ENST00000417172 POLR2MP0CAP2 368 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 DSG3P32926 999 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 TXKP42681 527 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 PNOCQ13519 176 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 ERO1BQ86YB8 467 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 CNNM3Q8NE01 707 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 REPS2Q8NFH8 660 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 RBM46Q8TBY0 533 aaKnown RBP19.24■□□□□ 0.67
CALD1-204ENST00000417172 OPTNQ96CV9 577 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 RIPK3Q9Y572 518 aa19.24■□□□□ 0.67
CALD1-204ENST00000417172 LAD1O00515 517 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 CTAGE5O15320 804 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 ACTN4O43707 911 aaKnown RBP19.23■□□□□ 0.67
CALD1-204ENST00000417172 ZBED4O75132 1171 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 LONP1P36776 959 aaKnown RBP19.23■□□□□ 0.67
CALD1-204ENST00000417172 SREBF1P36956 1147 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 PRPHP41219 470 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 TECP42680 631 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 MRE11P49959 708 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 PPP4R3AQ6IN85 833 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 ARMC9Q7Z3E5 817 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 ZFP91Q96JP5 570 aaPredicted RBP19.23■□□□□ 0.67
CALD1-204ENST00000417172 TIGD1Q96MW7 591 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 COL20A1Q9P218 1284 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 CTDP1Q9Y5B0 961 aaPredicted RBP19.23■□□□□ 0.67
CALD1-204ENST00000417172 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
CALD1-204ENST00000417172 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 GJA5P36382 358 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 PPATQ06203 517 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 TRAF1Q13077 416 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 COG2Q14746 738 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 POTEEQ6S8J3 1075 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 HAS1Q92839 578 aa19.23■□□□□ 0.67
CALD1-204ENST00000417172 A0A0G2JLL6 359 aaPredicted RBP19.22■□□□□ 0.67
CALD1-204ENST00000417172 FAM86B1E9PN63 330 aa19.22■□□□□ 0.67
CALD1-204ENST00000417172 FAM86B2P0C5J1 330 aa19.22■□□□□ 0.67
CALD1-204ENST00000417172 TMEM132BQ14DG7 1078 aa19.22■□□□□ 0.67
CALD1-204ENST00000417172 KARSQ15046 597 aaKnown RBP19.22■□□□□ 0.67
CALD1-204ENST00000417172 SASS6Q6UVJ0 657 aa19.22■□□□□ 0.67
CALD1-204ENST00000417172 PRRT2Q7Z6L0 340 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms