RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MRPL12P52815 198 aaKnown RBP26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 AK2P54819 239 aa26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 CCT2P78371 535 aaKnown RBP26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 FUT2Q10981 343 aa26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 CPLX2Q6PUV4 134 aaKnown RBP26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 BACH2Q9BYV9 841 aa26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 CNTNAP5Q8WYK1 1306 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 LOC102724159A0A0B4J2E5 919 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 SOWAHBA6NEL2 793 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 CPLX1O14810 134 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 CFBP00751 764 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 AKAP17AQ02040 695 aaKnown RBP26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 PWP2Q15269 919 aaKnown RBP26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 SLC30A10Q6XR72 485 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 IL27Q8NEV9 243 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 DNERQ8NFT8 737 aa26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 SLKQ9H2G2 1235 aaPredicted RBP26.66■■□□□ 1.86
SMARCB1-205ENST00000417137 CNGA1P29973 690 aa26.65■■□□□ 1.86
SMARCB1-205ENST00000417137 PAK6Q9NQU5 681 aaPredicted RBP26.65■■□□□ 1.86
SMARCB1-205ENST00000417137 hCG_1642624A0A1W2PR95 340 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 GCOM1H8Y6P7 765 aaPredicted RBP26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 POLR2MP0CAP2 368 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 IFNAR1P17181 557 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 STK3Q13188 491 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 PRPF38BQ5VTL8 546 aaKnown RBP26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 TBC1D5Q92609 795 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 FGD4Q96M96 766 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 TPCN1Q9ULQ1 816 aa26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 ZNFX1Q9P2E3 1918 aaKnown RBP26.64■■□□□ 1.86
SMARCB1-205ENST00000417137 hCG_1984214I3L0E3 225 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 PRPF3O43395 683 aaKnown RBP26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 MSCO60682 206 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 CYBAP13498 195 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 CCND3P30281 292 aaPredicted RBP26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 HSD17B4P51659 736 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 GHRHRQ02643 423 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 ARMCX2Q7L311 632 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 HEATR3Q7Z4Q2 680 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 ZNF713Q8N859 430 aaPredicted RBP26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 SYTL5Q8TDW5 730 aaPredicted RBP26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 CUL5Q93034 780 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 DEFB118Q96PH6 123 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 KIF2CQ99661 725 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 ABHD16BQ9H3Z7 469 aa26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 NCOA5Q9HCD5 579 aaKnown RBP26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.63■■□□□ 1.85
SMARCB1-205ENST00000417137 OPLAHO14841 1288 aa26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 SGPL1O95470 568 aa26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 SNAI1O95863 264 aaPredicted RBP26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 GJA8P48165 433 aa26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 ALDH5A1P51649 535 aaPredicted RBP26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 RABEP1Q15276 862 aa26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 PRAMEF19Q5SWL8 479 aa26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 TRIM22Q8IYM9 498 aa26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 NSUN6Q8TEA1 469 aaKnown RBP26.62■■□□□ 1.85
SMARCB1-205ENST00000417137 PFKFB2O60825 505 aa26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 CDKL5O76039 1030 aa26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 NTRK3Q16288 839 aa26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 U2AF1L4Q8WU68 220 aaKnown RBP26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 TBC1D32Q96NH3 1257 aa26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 PURBQ96QR8 312 aaKnown RBP26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 RNF26Q9BY78 433 aaPredicted RBP26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 BAZ2BQ9UIF8 2168 aaKnown RBP26.61■■□□□ 1.85
SMARCB1-205ENST00000417137 POTEFA5A3E0 1075 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 SEPT4O43236 478 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 TFRCP02786 760 aaKnown RBP26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 SSRP1Q08945 709 aaKnown RBP26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 ACVR2BQ13705 512 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 PFKFB3Q16875 520 aaPredicted RBP26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 NOL8Q76FK4 1167 aaKnown RBP26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 TRPV1Q8NER1 839 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 MORC4Q8TE76 937 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 RMDN3Q96TC7 470 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 SLC26A6Q9BXS9 759 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 PSTPIP2Q9H939 334 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 DDX20Q9UHI6 824 aaKnown RBP26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 SMCHD1A6NHR9 2005 aa26.6■■□□□ 1.85
SMARCB1-205ENST00000417137 SCG2P13521 617 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 ARHGEF16Q5VV41 709 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 PPP1R18Q6NYC8 613 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 TEX2Q8IWB9 1127 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 SMARCC2Q8TAQ2 1214 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 GPKOWQ92917 476 aaPredicted RBP eCLIP26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 PHKBQ93100 1093 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 TAAR1Q96RJ0 339 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 IWS1Q96ST2 819 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 BARHL2Q9NY43 387 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 ZHX1Q9UKY1 873 aaPredicted RBP26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 LIMCH1Q9UPQ0 1083 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 HTTP42858 3142 aa26.59■■□□□ 1.85
SMARCB1-205ENST00000417137 ZNF865P0CJ78 1059 aaPredicted RBP26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 HOXA13P31271 388 aaPredicted RBP26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 NAPAP54920 295 aa26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 PDE4DQ08499 809 aa26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 SCRN1Q12765 414 aa26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 WWC2Q6AWC2 1192 aa26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 GLT8D2Q9H1C3 349 aa26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 FAM184BQ9ULE4 1060 aa26.58■■□□□ 1.85
SMARCB1-205ENST00000417137 ASTN1O14525 1302 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms