RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 CCNI2Q6ZMN8 369 aaPredicted RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 FAM114A1Q8IWE2 563 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 FAM76AQ8TAV0 307 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 PPM1EQ8WY54 764 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 DHTKD1Q96HY7 919 aaPredicted RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 TTYH3Q9C0H2 523 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 PLEKHA4Q9H4M7 779 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 SBF2Q86WG5 1849 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 GOLGA6BA6NDN3 693 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 RCCD1A6NED2 376 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 RGL2O15211 777 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 ZNF185O15231 689 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 KLRC4O43908 158 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 C2orf54Q08AI8 447 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 GRAPQ13588 217 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 SPA17Q15506 151 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 GRAPLQ8TC17 118 aaPredicted RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 PCDHA4Q9UN74 947 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 FAM205AQ6ZU69 1335 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 PP2D1A8MPX8 630 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 VAV2P52735 878 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 DNAJC21Q5F1R6 531 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 SLC44A5Q8NCS7 719 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 GJD4Q96KN9 370 aaPredicted RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 ARPP21Q9UBL0 812 aaPredicted RBP14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 LAMB1P07942 1786 aa14.28□□□□□ -0.12
LRRTM1-205ENST00000417012 GOLGA6CA6NDK9 693 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 PDE2AO00408 941 aaPredicted RBP14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 GOLGA6DP0CG33 693 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 MYBL2P10244 700 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 MTIF2P46199 727 aaKnown RBP14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 TFAP4Q01664 338 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 RCSD1Q6JBY9 416 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 RASGRP4Q8TDF6 673 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 CNOT6LQ96LI5 555 aaKnown RBP14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 PURBQ96QR8 312 aaKnown RBP14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 PLIN2Q99541 437 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 SH3GLB2Q9NR46 395 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 IL17RBQ9NRM6 502 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 GOLGA6AQ9NYA3 693 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 FAM184BQ9ULE4 1060 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 KIAA1551Q9HCM1 1747 aa14.27□□□□□ -0.12
LRRTM1-205ENST00000417012 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 CYP27A1Q02318 531 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 CCDC96Q2M329 555 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 PRR5LQ6MZQ0 368 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 TGFBRAP1Q8WUH2 860 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 CCDC42Q96M95 316 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 CCSER1Q9C0I3 900 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 KBTBD4Q9NVX7 518 aa14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 SAP30BPQ9UHR5 308 aaKnown RBP14.27□□□□□ -0.13
LRRTM1-205ENST00000417012 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 USO1O60763 962 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 TACC1O75410 805 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 KLK7P49862 253 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 GPSM2P81274 684 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 FKBP15Q5T1M5 1219 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 TEX2Q8IWB9 1127 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 P2RX5Q93086 422 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 DUSP9Q99956 384 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 FAM107BQ9H098 131 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 DUSP10Q9Y6W6 482 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 LY75O60449 1722 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 CCNE1P24864 410 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 EEF2KMTQ96G04 330 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 KAT14Q9H8E8 782 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 MAGEF1Q9HAY2 307 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
LRRTM1-205ENST00000417012 SHOX2O60902 331 aaPredicted RBP14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 CDK17Q00537 523 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 SPTY2D1Q68D10 685 aaPredicted RBP14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 MAPKAPK5Q8IW41 473 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 RUBCNQ92622 972 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 TMEM60Q9H2L4 133 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 CUEDC2Q9H467 287 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 LRWD1Q9UFC0 647 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 A0A1W2PQJ5 194 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 ANKRD65E5RJM6 399 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 AGPSO00116 658 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 PPP1R2P41236 205 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 PDE4DQ08499 809 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 FIGNQ5HY92 759 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms