RNA–Protein interactions for RNA: ENST00000416995.1

LINC02558-201, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5

Gene LINC02558, Length 178 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-201ENST00000416995 HIPK3Q9H422 1215 aa17.92■□□□□ 0.46
LINC02558-201ENST00000416995 ZNF576Q9H609 170 aa17.92■□□□□ 0.46
LINC02558-201ENST00000416995 IL23AQ9NPF7 189 aa17.92■□□□□ 0.46
LINC02558-201ENST00000416995 ADD3Q9UEY8 706 aaKnown RBP17.92■□□□□ 0.46
LINC02558-201ENST00000416995 UMODL1Q5DID0 1318 aa17.92■□□□□ 0.46
LINC02558-201ENST00000416995 CCDC171Q6TFL3 1326 aa17.92■□□□□ 0.46
LINC02558-201ENST00000416995 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
LINC02558-201ENST00000416995 ZNF543Q08ER8 600 aa17.91■□□□□ 0.46
LINC02558-201ENST00000416995 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
LINC02558-201ENST00000416995 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
LINC02558-201ENST00000416995 CHD7Q9P2D1 2997 aa17.91■□□□□ 0.46
LINC02558-201ENST00000416995 PTPDC1A2A3K4 754 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 B4GALT4O60513 344 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 MFSD6Q6ZSS7 791 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 HERVK_113Q902F9 699 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 RILPL2Q969X0 211 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 TTC14Q96N46 770 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 NOC4LQ9BVI4 516 aaKnown RBP17.9■□□□□ 0.46
LINC02558-201ENST00000416995 SEZ6LQ9BYH1 1024 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 WDR11Q9BZH6 1224 aa17.9■□□□□ 0.46
LINC02558-201ENST00000416995 CXXC1Q9P0U4 656 aaPredicted RBP17.9■□□□□ 0.46
LINC02558-201ENST00000416995 LOC102724159A0A0B4J2E5 919 aa17.89■□□□□ 0.45
LINC02558-201ENST00000416995 RBM47A0AV96 593 aaKnown RBP17.89■□□□□ 0.45
LINC02558-201ENST00000416995 PCP11498 1178 aaKnown RBP17.89■□□□□ 0.45
LINC02558-201ENST00000416995 CALML3P27482 149 aa17.89■□□□□ 0.45
LINC02558-201ENST00000416995 PWP2Q15269 919 aaKnown RBP17.89■□□□□ 0.45
LINC02558-201ENST00000416995 RNF207Q6ZRF8 634 aa17.89■□□□□ 0.45
LINC02558-201ENST00000416995 WNT8AQ9H1J5 351 aa17.89■□□□□ 0.45
LINC02558-201ENST00000416995 MYO9BQ13459 2157 aa17.89■□□□□ 0.45
LINC02558-201ENST00000416995 MUC3AQ02505 3323 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 SDSP20132 328 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 CCL23P55773 120 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
LINC02558-201ENST00000416995 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 ALDH8A1Q9H2A2 487 aaPredicted RBP17.88■□□□□ 0.45
LINC02558-201ENST00000416995 NEDD4P46934 1319 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 WDR19Q8NEZ3 1342 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 TTC28Q96AY4 2481 aa17.88■□□□□ 0.45
LINC02558-201ENST00000416995 FGBP02675 491 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 EDNRBP24530 442 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 PURAQ00577 322 aaKnown RBP17.87■□□□□ 0.45
LINC02558-201ENST00000416995 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 OTOP2Q7RTS6 562 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 VWCEQ96DN2 955 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 ZKSCAN3Q9BRR0 538 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 RNF41Q9H4P4 317 aaPredicted RBP17.87■□□□□ 0.45
LINC02558-201ENST00000416995 PNMA2Q9UL42 364 aa17.87■□□□□ 0.45
LINC02558-201ENST00000416995 GOLGA8HP0CJ92 632 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 PDE4DQ08499 809 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 PLEKHM2Q8IWE5 1019 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 OR6J1Q8NGC5 347 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 ESR2Q92731 530 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 CPVLQ9H3G5 476 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 PRDM12Q9H4Q4 367 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
LINC02558-201ENST00000416995 POLR3EQ9NVU0 708 aa17.86■□□□□ 0.45
LINC02558-201ENST00000416995 ZNF213O14771 459 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 MYL3P08590 195 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 CYP2C9P11712 490 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 CPT1AP50416 773 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 MFAP1P55081 439 aaKnown RBP17.85■□□□□ 0.45
LINC02558-201ENST00000416995 RAB30Q15771 203 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 LAMA4Q16363 1823 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 USH1GQ495M9 461 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 CHD1LQ86WJ1 897 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 DGKHQ86XP1 1220 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 DNERQ8NFT8 737 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 SCLYQ96I15 445 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 UBA5Q9GZZ9 404 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 MTIF3Q9H2K0 278 aaKnown RBP17.85■□□□□ 0.45
LINC02558-201ENST00000416995 OSBPL3Q9H4L5 887 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 MSRAQ9UJ68 235 aa17.85■□□□□ 0.45
LINC02558-201ENST00000416995 YBX2Q9Y2T7 364 aaKnown RBP17.85■□□□□ 0.45
LINC02558-201ENST00000416995 SCN10AQ9Y5Y9 1956 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 GBF1Q92538 1859 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 TNKSO95271 1327 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 IGHDP01880 384 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 NUCB1Q02818 461 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 AAMPQ13685 434 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 PPP2R5BQ15173 497 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 GPATCH4Q5T3I0 446 aaKnown RBP17.84■□□□□ 0.45
LINC02558-201ENST00000416995 RGS22Q8NE09 1264 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 SCFD2Q8WU76 684 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 PPP1R13LQ8WUF5 828 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 COPS5Q92905 334 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 MTG1Q9BT17 334 aaPredicted RBP17.84■□□□□ 0.45
LINC02558-201ENST00000416995 NKX2-4Q9H2Z4 354 aa17.84■□□□□ 0.45
LINC02558-201ENST00000416995 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
LINC02558-201ENST00000416995 A6NJR5 290 aa17.83■□□□□ 0.44
LINC02558-201ENST00000416995 NKRFO15226 690 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC02558-201ENST00000416995 KDM4AO75164 1064 aa17.83■□□□□ 0.44
LINC02558-201ENST00000416995 ADGRE1Q14246 886 aa17.83■□□□□ 0.44
LINC02558-201ENST00000416995 NBPF20Q3BBV1 942 aa17.83■□□□□ 0.44
LINC02558-201ENST00000416995 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
LINC02558-201ENST00000416995 RPUSD2Q8IZ73 545 aaKnown RBP17.83■□□□□ 0.44
LINC02558-201ENST00000416995 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
LINC02558-201ENST00000416995 ANKS1AQ92625 1134 aa17.83■□□□□ 0.44
LINC02558-201ENST00000416995 GAS2L1Q99501 681 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms