RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NEDD4P46934 1319 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 EIF4E1BA6NMX2 242 aaKnown RBP14.16□□□□□ -0.14
SCN1B-202ENST00000415950 A6NNZ2 444 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 SESN3P58005 492 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 TUBB8Q3ZCM7 444 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 MYCT1Q8N699 235 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 PROCA1Q8NCQ7 364 aaPredicted RBP14.16□□□□□ -0.14
SCN1B-202ENST00000415950 AP1M1Q9BXS5 423 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 SMARCAL1Q9NZC9 954 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 A0A087WUV0 522 aaPredicted RBP14.16□□□□□ -0.14
SCN1B-202ENST00000415950 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.16□□□□□ -0.14
SCN1B-202ENST00000415950 ARHGEF35A5YM69 484 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 NMT2O60551 498 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 SEPT6Q14141 434 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 DCUN1D2Q6PH85 259 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 TAOK1Q7L7X3 1001 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 PANX2Q96RD6 677 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 VPS37BQ9H9H4 285 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 GLI2P10070 1586 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 NOL3O60936 208 aaKnown RBP14.16□□□□□ -0.14
SCN1B-202ENST00000415950 CD19P15391 556 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 RASGRF1Q13972 1273 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 BSPRYQ5W0U4 402 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 ABHD10Q9NUJ1 306 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 ATP8A1Q9Y2Q0 1164 aa14.16□□□□□ -0.14
SCN1B-202ENST00000415950 ACTN3Q08043 901 aaPredicted RBP14.15□□□□□ -0.14
SCN1B-202ENST00000415950 ZKSCAN8Q15776 578 aaPredicted RBP14.15□□□□□ -0.14
SCN1B-202ENST00000415950 ICE2Q659A1 982 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 CTAGE3PQ8IX95 158 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 GJA10Q969M2 543 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 PACSIN2Q9UNF0 486 aaPredicted RBP14.15□□□□□ -0.14
SCN1B-202ENST00000415950 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 CCDC62Q6P9F0 684 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 CPXCR1Q8N123 301 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 SH2D3CQ8N5H7 860 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 KIFAP3Q92845 792 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 STRBPQ96SI9 672 aaKnown RBP14.15□□□□□ -0.14
SCN1B-202ENST00000415950 ATP1A1P05023 1023 aaKnown RBP14.15□□□□□ -0.14
SCN1B-202ENST00000415950 TCP11X2Q5H9J9 407 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 LRRC47Q8N1G4 583 aaKnown RBP14.15□□□□□ -0.14
SCN1B-202ENST00000415950 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
SCN1B-202ENST00000415950 PRCPP42785 496 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 EXOSC10Q01780 885 aaKnown RBP14.14□□□□□ -0.15
SCN1B-202ENST00000415950 MB21D2Q8IYB1 491 aaPredicted RBP14.14□□□□□ -0.15
SCN1B-202ENST00000415950 MYOCDQ8IZQ8 938 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 HPS3Q969F9 1004 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 RILPQ96NA2 401 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 PCCAP05165 728 aaPredicted RBP14.14□□□□□ -0.15
SCN1B-202ENST00000415950 MRPS9P82933 396 aaKnown RBP14.14□□□□□ -0.15
SCN1B-202ENST00000415950 TCP10Q12799 353 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 HAUS3Q68CZ6 603 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 CASC4Q6P4E1 433 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 EFCAB13Q8IY85 973 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 VCX3BQ9H321 246 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 DNM3Q9UQ16 869 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 GOLGA8KD6RF30 607 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 MAGEA9P43362 315 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 CHRNDQ07001 517 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 TC2NQ8N9U0 490 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 RNF26Q9BY78 433 aaPredicted RBP14.14□□□□□ -0.15
SCN1B-202ENST00000415950 ATP7BP35670 1465 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 OR52Z1P0C646 297 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 GBP1P32455 592 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 DYNLL2Q96FJ2 89 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 FHOD1Q9Y613 1164 aa14.14□□□□□ -0.15
SCN1B-202ENST00000415950 SLC1A4P43007 532 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 CYP2J2P51589 502 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 FBXW10Q5XX13 1052 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 TADA2BQ86TJ2 420 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 ZNF609O15014 1411 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 MROH7-TTC4A0A0A0MT08 1334 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 CYP27B1O15528 508 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 CFBP00751 764 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 HLFQ16534 295 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 SRLQ86TD4 932 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 RNF10Q8N5U6 811 aaKnown RBP14.13□□□□□ -0.15
SCN1B-202ENST00000415950 MSANTD4Q8NCY6 345 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 BANK1Q8NDB2 785 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 P2RX5Q93086 422 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 CFAP57Q96MR6 1250 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 MMS19Q96T76 1030 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 NOVA2Q9UNW9 492 aaKnown RBP14.13□□□□□ -0.15
SCN1B-202ENST00000415950 GAS8O95995 478 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 MAN1A1P33908 653 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 ADAM9Q13443 819 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
SCN1B-202ENST00000415950 HIBCHQ6NVY1 386 aaPredicted RBP14.13□□□□□ -0.15
SCN1B-202ENST00000415950 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 GPBP1Q86WP2 473 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 DNAJC17Q9NVM6 304 aaKnown RBP14.13□□□□□ -0.15
SCN1B-202ENST00000415950 PCDHA12Q9UN75 941 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 PTPN22Q9Y2R2 807 aa14.13□□□□□ -0.15
SCN1B-202ENST00000415950 MYCLP12524 364 aaPredicted RBP14.13□□□□□ -0.15
SCN1B-202ENST00000415950 PFDN4Q9NQP4 134 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms