RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 SLPIP03973 132 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 CTSHP09668 335 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 ACVRL1P37023 503 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 CRIP3Q6Q6R5 217 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 GK5Q6ZS86 529 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 NETO2Q8NC67 525 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 NLGN2Q8NFZ4 835 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 SMARCC1Q92922 1105 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 RNF34Q969K3 372 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 LRRC3Q9BY71 257 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 JADE2Q9NQC1 790 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 RNF19AQ9NV58 838 aa5.51□□□□□ -1.53
TRAPPC13-203ENST00000415825 NPEPPSL1A6NEC2 478 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 SUPT5HO00267 1087 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 LAMTOR5O43504 91 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 NME1P15531 152 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 ZC3H18Q86VM9 953 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 TTLL6Q8N841 843 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 LCORQ96JN0 433 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 BCL11AQ9H165 835 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 EHMT1Q9H9B1 1298 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 SUCOQ9UBS9 1254 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 TCAF1Q9Y4C2 921 aa5.5□□□□□ -1.53
TRAPPC13-203ENST00000415825 H0Y8X5 98 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 CD3EP07766 207 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 GLI4P10075 376 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 RPL13P26373 211 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 EIF4A3P38919 411 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 REXO1Q8N1G1 1221 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 NOX5Q96PH1 765 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 SRRTQ9BXP5 876 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 KLC2Q9H0B6 622 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 SEMA4AQ9H3S1 761 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 SPATA6Q9NWH7 488 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 PLA2G2DQ9UNK4 145 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 HS3ST3A1Q9Y663 406 aa5.49□□□□□ -1.53
TRAPPC13-203ENST00000415825 AMHP03971 560 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 CYP1A1P04798 512 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 ITGA4P13612 1032 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 TGFB2P61812 414 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 TCEAL1Q15170 157 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 SEZ6Q53EL9 994 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 EEF1DP3Q658K8 133 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 MCTP2Q6DN12 878 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 LIMS2Q7Z4I7 341 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 CIR1Q86X95 450 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 ZNF341Q9BYN7 854 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 RXFP1Q9HBX9 757 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 KBTBD4Q9NVX7 518 aa5.48□□□□□ -1.53
TRAPPC13-203ENST00000415825 FAM86C2PA6NEL3 165 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 TNFRSF10CO14798 259 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 CEBPAP49715 358 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 FBXL19Q6PCT2 694 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 ETV3LQ6ZN32 361 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 FIBCD1Q8N539 461 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 LINC00482Q8N8I6 264 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 KYQ8NBH2 561 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 BRF1Q92994 677 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 ZNF747Q9BV97 191 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 AP5M1Q9H0R1 490 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 KCNQ5Q9NR82 932 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 FHOD1Q9Y613 1164 aa5.47□□□□□ -1.53
TRAPPC13-203ENST00000415825 TRBV23OR9-2A0A075B6M9 112 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 GARTP22102 1010 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 THBS2P35442 1172 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 SEPHS1P49903 392 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 PRAMEF18Q5VWM3 479 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 PALM2Q8IXS6 379 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 ZDHHC15Q96MV8 337 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 FAM161BQ96MY7 647 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 C11orf84Q9BUA3 381 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 PCED1AQ9H1Q7 454 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 RWDD3Q9Y3V2 267 aa5.46□□□□□ -1.54
TRAPPC13-203ENST00000415825 GREM1O60565 184 aa5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 PMS1P54277 932 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 CD300LDQ6UXZ3 194 aa5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 SND1Q7KZF4 910 aaKnown RBP eCLIP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 DCP2Q8IU60 420 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 Q8N1X5 172 aa5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 TXNDC5Q8NBS9 432 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 ZNF296Q8WUU4 475 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 FCRL3Q96P31 734 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 YIPF4Q9BSR8 244 aa5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 NOL6Q9H6R4 1146 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 GP6Q9HCN6 339 aa5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 NGRNQ9NPE2 291 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-203ENST00000415825 C9orf118A6NHY6 69 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 MUSKO15146 869 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 CYP7B1O75881 506 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 IMPDH2P12268 514 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 SELENOPP49908 381 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 ZNF445P59923 1031 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 CLCQ05315 142 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms