RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 MYH4Q9Y623 1939 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 BICDL2A1A5D9 508 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 RAD21O60216 631 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 PPP1R11O60927 126 aaPredicted RBP13.85□□□□□ -0.19
UBA3-203ENST00000415609 SLURP2P0DP57 97 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 FECHP22830 423 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
UBA3-203ENST00000415609 CACNB3P54284 484 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 GPATCH4Q5T3I0 446 aaKnown RBP13.85□□□□□ -0.19
UBA3-203ENST00000415609 MSL1Q68DK7 614 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 TMTC1Q8IUR5 882 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 MB21D1Q8N884 522 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 CUL5Q93034 780 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 P2RX5Q93086 422 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 RNF225M0QZC1 329 aaPredicted RBP13.85□□□□□ -0.19
UBA3-203ENST00000415609 FCER1AP12319 257 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
UBA3-203ENST00000415609 KRT9P35527 623 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 RBM5P52756 815 aaKnown RBP eCLIP13.85□□□□□ -0.19
UBA3-203ENST00000415609 ERVK-24P63145 666 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 TCP10Q12799 353 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 STK4Q13043 487 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 GRB10Q13322 594 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 ARHGAP29Q52LW3 1261 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 CYP26C1Q6V0L0 522 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 ZFPM1Q8IX07 1006 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 IRX2Q9BZI1 471 aaPredicted RBP13.85□□□□□ -0.19
UBA3-203ENST00000415609 EHD4Q9H223 541 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
UBA3-203ENST00000415609 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
UBA3-203ENST00000415609 A0A0U1RQJ8 604 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 POTEMA6NI47 508 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 ZBTB5O15062 677 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 KIF5CO60282 957 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 TADA3O75528 432 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 APBA3O96018 575 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 CCNE1P24864 410 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 PPP1R2P41236 205 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 CNNM4Q6P4Q7 775 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 PODNQ7Z5L7 613 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 ATRIPQ8WXE1 791 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 CCDC17Q96LX7 622 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 ZDHHC15Q96MV8 337 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 DUSP9Q99956 384 aaKnown RBP13.84□□□□□ -0.19
UBA3-203ENST00000415609 GTPBP4Q9BZE4 634 aaKnown RBP13.84□□□□□ -0.19
UBA3-203ENST00000415609 OGFRQ9NZT2 677 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 STK17AQ9UEE5 414 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 MRFAP1Q9Y605 127 aa13.84□□□□□ -0.19
UBA3-203ENST00000415609 FAM196BA6NMK8 535 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 EFCAB8A8MWE9 144 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 B4DLN1 442 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 MRPL12P52815 198 aaKnown RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 MCM6Q14566 821 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 C2CD5Q86YS7 1000 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 FAM114A1Q8IWE2 563 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 SNX29Q8TEQ0 813 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 PNMA5Q96PV4 448 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 A0A1W2PQC6 194 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 EDIL3O43854 480 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 MARCH6O60337 910 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 PPP2R3AQ06190 1150 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 KRT79Q5XKE5 535 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 ZSCAN29Q8IWY8 852 aaPredicted RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 HPS3Q969F9 1004 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 EEF2KMTQ96G04 330 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 TUBGCP2Q9BSJ2 902 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 DNAJC18Q9H819 358 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.2
UBA3-203ENST00000415609 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
UBA3-203ENST00000415609 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 PLSCR1O15162 318 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 H2AFXP16104 143 aaPredicted RBP13.82□□□□□ -0.2
UBA3-203ENST00000415609 MTIF2P46199 727 aaKnown RBP13.82□□□□□ -0.2
UBA3-203ENST00000415609 CLK2P49760 499 aaKnown RBP13.82□□□□□ -0.2
UBA3-203ENST00000415609 DNM2P50570 870 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 KIAA0895Q8NCT3 520 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 ZNF507Q8TCN5 953 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 DHX36Q9H2U1 1008 aaKnown RBP13.82□□□□□ -0.2
UBA3-203ENST00000415609 PSTPIP2Q9H939 334 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 SLC39A2Q9NP94 309 aa13.82□□□□□ -0.2
UBA3-203ENST00000415609 LUC7L2Q9Y383 392 aaKnown RBP13.82□□□□□ -0.2
UBA3-203ENST00000415609 MYMKA6NI61 221 aa13.81□□□□□ -0.2
UBA3-203ENST00000415609 ECE2O60344 883 aa13.81□□□□□ -0.2
UBA3-203ENST00000415609 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
UBA3-203ENST00000415609 PDIA5Q14554 519 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms