RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 TMEM39AQ9NV64 488 aa29.17■■■□□ 2.26
HLA-C-204ENST00000415537 ERICH2A1L162 156 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 DYNC1LI2O43237 492 aaPredicted RBP29.16■■■□□ 2.26
HLA-C-204ENST00000415537 ZEB2O60315 1214 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 NKX3-2P78367 333 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 GPR153Q6NV75 609 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 RALYLQ86SE5 291 aaKnown RBP29.16■■■□□ 2.26
HLA-C-204ENST00000415537 VAT1LQ9HCJ6 419 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 Q9Y3F1 56 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 LAMA3Q16787 3333 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 ABCB11O95342 1321 aa29.16■■■□□ 2.26
HLA-C-204ENST00000415537 A0A0U1RQG5 324 aaPredicted RBP29.15■■■□□ 2.26
HLA-C-204ENST00000415537 B4DLN1 442 aa29.15■■■□□ 2.26
HLA-C-204ENST00000415537 RAG1P15918 1043 aa29.15■■■□□ 2.26
HLA-C-204ENST00000415537 MRPL12P52815 198 aaKnown RBP29.15■■■□□ 2.26
HLA-C-204ENST00000415537 SEC23AQ15436 765 aa29.15■■■□□ 2.26
HLA-C-204ENST00000415537 DNERQ8NFT8 737 aa29.15■■■□□ 2.26
HLA-C-204ENST00000415537 NCOA7Q8NI08 942 aa29.15■■■□□ 2.26
HLA-C-204ENST00000415537 CTAGE5O15320 804 aa29.14■■■□□ 2.26
HLA-C-204ENST00000415537 PDE4DQ08499 809 aa29.14■■■□□ 2.26
HLA-C-204ENST00000415537 FAAP100Q0VG06 881 aa29.14■■■□□ 2.26
HLA-C-204ENST00000415537 FSCN1Q16658 493 aaKnown RBP29.14■■■□□ 2.26
HLA-C-204ENST00000415537 RGS22Q8NE09 1264 aa29.14■■■□□ 2.26
HLA-C-204ENST00000415537 IFIT3O14879 490 aaKnown RBP29.13■■■□□ 2.25
HLA-C-204ENST00000415537 KIAA0355O15063 1070 aa29.13■■■□□ 2.25
HLA-C-204ENST00000415537 SART3Q15020 963 aaKnown RBP29.13■■■□□ 2.25
HLA-C-204ENST00000415537 QRICH1Q2TAL8 776 aa29.13■■■□□ 2.25
HLA-C-204ENST00000415537 FBXO11Q86XK2 927 aa29.13■■■□□ 2.25
HLA-C-204ENST00000415537 WDR11Q9BZH6 1224 aa29.13■■■□□ 2.25
HLA-C-204ENST00000415537 E7EWF7 191 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 ARVCFO00192 962 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 CABYRO75952 493 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 MCF2L2Q86YR7 1114 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 STAG2Q8N3U4 1231 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 MAP4K1Q92918 833 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 MAF1Q9H063 256 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 JMJD4Q9H9V9 463 aa29.12■■■□□ 2.25
HLA-C-204ENST00000415537 MRPL11Q9Y3B7 192 aaKnown RBP29.12■■■□□ 2.25
HLA-C-204ENST00000415537 KLRF2D3W0D1 207 aa29.11■■■□□ 2.25
HLA-C-204ENST00000415537 CDK7P50613 346 aa29.11■■■□□ 2.25
HLA-C-204ENST00000415537 DUSP28Q4G0W2 176 aa29.11■■■□□ 2.25
HLA-C-204ENST00000415537 CXCL17Q6UXB2 119 aa29.11■■■□□ 2.25
HLA-C-204ENST00000415537 TLR3O15455 904 aaKnown RBP29.1■■■□□ 2.25
HLA-C-204ENST00000415537 ITGB8P26012 769 aa29.1■■■□□ 2.25
HLA-C-204ENST00000415537 WTAPQ15007 396 aa29.1■■■□□ 2.25
HLA-C-204ENST00000415537 RBM8AQ9Y5S9 174 aaKnown RBP29.1■■■□□ 2.25
HLA-C-204ENST00000415537 PTGS1P23219 599 aa29.09■■■□□ 2.25
HLA-C-204ENST00000415537 SHHQ15465 462 aa29.09■■■□□ 2.25
HLA-C-204ENST00000415537 TMEM63BQ5T3F8 832 aa29.09■■■□□ 2.25
HLA-C-204ENST00000415537 MAD2L2Q9UI95 211 aa29.09■■■□□ 2.25
HLA-C-204ENST00000415537 EDNRBP24530 442 aa29.08■■■□□ 2.25
HLA-C-204ENST00000415537 CENPQQ7L2Z9 268 aaPredicted RBP29.08■■■□□ 2.25
HLA-C-204ENST00000415537 CHST3Q7LGC8 479 aa29.08■■■□□ 2.25
HLA-C-204ENST00000415537 DEFB123Q8N688 67 aa29.08■■■□□ 2.25
HLA-C-204ENST00000415537 AMNQ9BXJ7 453 aa29.08■■■□□ 2.25
HLA-C-204ENST00000415537 RBM47A0AV96 593 aaKnown RBP29.07■■■□□ 2.24
HLA-C-204ENST00000415537 PALM3A6NDB9 673 aaPredicted RBP29.07■■■□□ 2.24
HLA-C-204ENST00000415537 TIMP1P01033 207 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 FPGSQ05932 587 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 PPP2R5BQ15173 497 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 C9orf50Q5SZB4 431 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 SCFD2Q8WU76 684 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 TBC1D5Q92609 795 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 TAF6LQ9Y6J9 622 aa29.07■■■□□ 2.24
HLA-C-204ENST00000415537 NKRFO15226 690 aaKnown RBP eCLIP29.06■■■□□ 2.24
HLA-C-204ENST00000415537 CPT1AP50416 773 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 ITGA7Q13683 1181 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 TMEM67Q5HYA8 995 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 STOX1Q6ZVD7 989 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 FAM126BQ8IXS8 530 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 OR6J1Q8NGC5 347 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 NSUN6Q8TEA1 469 aaKnown RBP29.06■■■□□ 2.24
HLA-C-204ENST00000415537 SEZ6LQ9BYH1 1024 aa29.06■■■□□ 2.24
HLA-C-204ENST00000415537 ZBTB5O15062 677 aa29.05■■■□□ 2.24
HLA-C-204ENST00000415537 GRM4Q14833 912 aa29.05■■■□□ 2.24
HLA-C-204ENST00000415537 BRDTQ58F21 947 aaPredicted RBP29.05■■■□□ 2.24
HLA-C-204ENST00000415537 CATIPQ7Z7H3 387 aa29.05■■■□□ 2.24
HLA-C-204ENST00000415537 SYTL5Q8TDW5 730 aaPredicted RBP29.05■■■□□ 2.24
HLA-C-204ENST00000415537 TAAR1Q96RJ0 339 aa29.05■■■□□ 2.24
HLA-C-204ENST00000415537 TBX21Q9UL17 535 aa29.05■■■□□ 2.24
HLA-C-204ENST00000415537 CFBP00751 764 aa29.04■■■□□ 2.24
HLA-C-204ENST00000415537 Q7L0L9 218 aa29.04■■■□□ 2.24
HLA-C-204ENST00000415537 RMDN3Q96TC7 470 aa29.04■■■□□ 2.24
HLA-C-204ENST00000415537 GPHNQ9NQX3 736 aaPredicted RBP29.04■■■□□ 2.24
HLA-C-204ENST00000415537 POLR3EQ9NVU0 708 aa29.04■■■□□ 2.24
HLA-C-204ENST00000415537 TXNP10599 105 aaKnown RBP29.03■■■□□ 2.24
HLA-C-204ENST00000415537 TRAF1Q13077 416 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 TTLL4Q14679 1199 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 CASC1Q6TDU7 716 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 HOMER1Q86YM7 354 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 MB21D2Q8IYB1 491 aaPredicted RBP29.03■■■□□ 2.24
HLA-C-204ENST00000415537 SLC43A3Q8NBI5 491 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 MTMR8Q96EF0 704 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 IWS1Q96ST2 819 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 ESYT1Q9BSJ8 1104 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 SENP2Q9HC62 589 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 PCDHA1Q9Y5I3 950 aa29.03■■■□□ 2.24
HLA-C-204ENST00000415537 STXBP2Q15833 593 aa29.02■■■□□ 2.24
HLA-C-204ENST00000415537 ARHGEF16Q5VV41 709 aa29.02■■■□□ 2.24
HLA-C-204ENST00000415537 MFSD5Q6N075 450 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms