RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TFCP2Q12800 502 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 SHROOM1Q2M3G4 852 aaPredicted RBP7.45□□□□□ -1.22
LMBR1-204ENST00000415428 SERINC5Q86VE9 423 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 IWS1Q96ST2 819 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 AVPR2P30518 371 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 TNFAIP2Q03169 654 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 PHLDB3Q6NSJ2 640 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 CCDC84Q86UT8 332 aaPredicted RBP7.45□□□□□ -1.22
LMBR1-204ENST00000415428 STAG1Q8WVM7 1258 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 KAT2BQ92831 832 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 RIPOR3Q96MK2 946 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 FAM161BQ96MY7 647 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 NOL10Q9BSC4 688 aaKnown RBP7.45□□□□□ -1.22
LMBR1-204ENST00000415428 RNF216Q9NWF9 866 aaPredicted RBP7.45□□□□□ -1.22
LMBR1-204ENST00000415428 CYP39A1Q9NYL5 469 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 UMODL1Q5DID0 1318 aa7.45□□□□□ -1.22
LMBR1-204ENST00000415428 CYP2C18P33260 490 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 ATP8B2P98198 1209 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 DDX23Q9BUQ8 820 aaKnown RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 PHF7Q9BWX1 381 aaPredicted RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 ACAD9Q9H845 621 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 USTQ9Y2C2 406 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 TMEM8BA6NDV4 472 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 NBNO60934 754 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 PAPSS2O95340 614 aaPredicted RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 PLCD1P51178 756 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 ZNF710Q8N1W2 664 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 FBXO22Q8NEZ5 403 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 CMASQ8NFW8 434 aaPredicted RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 PRDM5Q9NQX1 630 aaPredicted RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 CD207Q9UJ71 328 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 FOXD2O60548 495 aaPredicted RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 LGR5O75473 907 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 PGK1P00558 417 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 PCP11498 1178 aaKnown RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 TGFBRAP1Q8WUH2 860 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 GREB1Q4ZG55 1949 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 RANBP2P49792 3224 aaKnown RBP7.44□□□□□ -1.22
LMBR1-204ENST00000415428 RAD50Q92878 1312 aa7.44□□□□□ -1.22
LMBR1-204ENST00000415428 GFRA3O60609 400 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 ICAM1P05362 532 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
LMBR1-204ENST00000415428 SEPT2Q15019 361 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 KCNV1Q6PIU1 500 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 DCAF4Q8WV16 495 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 MTMR8Q96EF0 704 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 KATNAL1Q9BW62 490 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 DLGAP2Q9P1A6 1054 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 LAS1LQ9Y4W2 734 aaKnown RBP7.43□□□□□ -1.22
LMBR1-204ENST00000415428 MIA3Q5JRA6 1907 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 UBTFL1P0CB47 393 aaPredicted RBP7.43□□□□□ -1.22
LMBR1-204ENST00000415428 SLURP2P0DP57 97 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 PUM1Q14671 1186 aaKnown RBP eCLIP7.43□□□□□ -1.221e-6■□□□□ 8.1
LMBR1-204ENST00000415428 LRRC8DQ7L1W4 858 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 KDF1Q8NAX2 398 aaPredicted RBP7.43□□□□□ -1.22
LMBR1-204ENST00000415428 PPTC7Q8NI37 304 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 HDAC7Q8WUI4 952 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 CLEC4DQ8WXI8 215 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 RXFP3Q9NSD7 469 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 TTC3P53804 2025 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 C2orf16Q68DN1 1984 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 ADD2P35612 726 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 CAMK1Q14012 370 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 DUSP6Q16828 381 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 FSD1Q9BTV5 496 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 CACNA2D2Q9NY47 1150 aa7.43□□□□□ -1.22
LMBR1-204ENST00000415428 NRCAMQ92823 1304 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 STAM2O75886 525 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 MYCP01106 439 aaPredicted RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 TDGF1P13385 188 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 MBTPS1Q14703 1052 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 EPC2Q52LR7 807 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 PRAMEF19Q5SWL8 479 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 NEDD1Q8NHV4 660 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 SSH1Q8WYL5 1049 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 CRNKL1Q9BZJ0 848 aaKnown RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 HOXB8P17481 243 aaPredicted RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 PLCB3Q01970 1234 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 ARHGAP1Q07960 439 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 NXPE3Q969Y0 559 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 NECTIN4Q96NY8 510 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 ELAC1Q9H777 363 aaKnown RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 IRAK3Q9Y616 596 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 INPPL1O15357 1258 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 AMHP03971 560 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 CKBP12277 381 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 ALDH5A1P51649 535 aaPredicted RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 PICALMQ13492 652 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 ALX1Q15699 326 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 CWF19L1Q69YN2 538 aaKnown RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
LMBR1-204ENST00000415428 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 PHOX2BQ99453 314 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 RTKNQ9BST9 563 aa7.42□□□□□ -1.22
LMBR1-204ENST00000415428 PAGR1Q9BTK6 254 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms