RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 SLC1A4P43007 532 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 GMCL1Q96IK5 515 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 SEZ6LQ9BYH1 1024 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 ZNF287Q9HBT7 754 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 INCENPQ9NQS7 918 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 PRR12Q9ULL5 1215 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 TNKSO95271 1327 aa18.94■□□□□ 0.62
SYNGR1-206ENST00000415332 BRWD1Q9NSI6 2320 aa18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 GNAT2P19087 354 aa18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 POU3F3P20264 500 aaPredicted RBP18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 NSMFQ6X4W1 530 aa18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 MORC4Q8TE76 937 aa18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 VTA1Q9NP79 307 aa18.93■□□□□ 0.62
SYNGR1-206ENST00000415332 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 NMT2O60551 498 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 DUSP28Q4G0W2 176 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 RCSD1Q6JBY9 416 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 SPRED2Q7Z698 418 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 C1QTNF1Q9BXJ1 281 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 IL17RBQ9NRM6 502 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 MTMR7Q9Y216 660 aa18.92■□□□□ 0.62
SYNGR1-206ENST00000415332 RBAK-RBAKDNI3L0D1 243 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 PLA2G6O60733 806 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 PFKMP08237 780 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 MYL3P08590 195 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 PURAQ00577 322 aaKnown RBP18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 PDE4BQ07343 736 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 PPARAQ07869 468 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 BAATQ14032 418 aaPredicted RBP18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 AAK1Q2M2I8 961 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 ARNTL2Q8WYA1 636 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 LRFN3Q9BTN0 628 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 WDR11Q9BZH6 1224 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 CCPG1Q9ULG6 757 aa18.91■□□□□ 0.62
SYNGR1-206ENST00000415332 GTPBP6O43824 516 aaPredicted RBP18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 TLL1O43897 1013 aa18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 ZFYP08048 801 aaPredicted RBP18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 ALDH5A1P51649 535 aaPredicted RBP18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 TAP1Q03518 808 aa18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 KHSRPQ92945 711 aaKnown RBP eCLIP18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 POLR3EQ9NVU0 708 aa18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 STX8Q9UNK0 236 aa18.9■□□□□ 0.62
SYNGR1-206ENST00000415332 SUPT20HL2P0C7V6 817 aa18.89■□□□□ 0.61
SYNGR1-206ENST00000415332 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
SYNGR1-206ENST00000415332 NBPF20Q3BBV1 942 aa18.89■□□□□ 0.61
SYNGR1-206ENST00000415332 TTBK2Q6IQ55 1244 aa18.89■□□□□ 0.61
SYNGR1-206ENST00000415332 NAPBQ9H115 298 aa18.89■□□□□ 0.61
SYNGR1-206ENST00000415332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
SYNGR1-206ENST00000415332 RBM47A0AV96 593 aaKnown RBP18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 NFIBO00712 420 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 ICAM1P05362 532 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 IQCF3P0C7M6 154 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 SLC16A2P36021 539 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 CTDSPL2Q05D32 466 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 FAM47CQ5HY64 1035 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 C20orf194Q5TEA3 1177 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 COPS5Q92905 334 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 MTG1Q9BT17 334 aaPredicted RBP18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 NACAP1Q9BZK3 213 aa18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 RANBP17Q9H2T7 1088 aaKnown RBP18.88■□□□□ 0.61
SYNGR1-206ENST00000415332 FOXP2O15409 715 aa18.87■□□□□ 0.61
SYNGR1-206ENST00000415332 LPXNO60711 386 aa18.87■□□□□ 0.61
SYNGR1-206ENST00000415332 ACTN1P12814 892 aa18.87■□□□□ 0.61
SYNGR1-206ENST00000415332 GRB10Q13322 594 aa18.87■□□□□ 0.61
SYNGR1-206ENST00000415332 HERC6Q8IVU3 1022 aa18.87■□□□□ 0.61
SYNGR1-206ENST00000415332 TSPY2A6NKD2 308 aa18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 CPT1AP50416 773 aa18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 SLC30A10Q6XR72 485 aa18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 TMCO2Q7Z6W1 182 aaPredicted RBP18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 PHOSPHO2Q8TCD6 241 aa18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 ADD3Q9UEY8 706 aaKnown RBP18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 COG5Q9UP83 839 aa18.86■□□□□ 0.61
SYNGR1-206ENST00000415332 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 LCHNA4D1U4 455 aa18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 RFC2P35250 354 aa18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 CCDC96Q2M329 555 aa18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 C11orf16Q9NQ32 467 aa18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
SYNGR1-206ENST00000415332 FRMPD2Q68DX3 1309 aaPredicted RBP18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 CALML3P27482 149 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 NOVP48745 357 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 GPNMBQ14956 572 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 ZMYM1Q5SVZ6 1142 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 NFRKBQ6P4R8 1299 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 RETREG2Q8NC44 543 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 CLEC4DQ8WXI8 215 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 HLA-CQ95604 372 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
SYNGR1-206ENST00000415332 FAM86C2PA6NEL3 165 aa18.83■□□□□ 0.6
SYNGR1-206ENST00000415332 PITPNM1O00562 1244 aa18.83■□□□□ 0.6
SYNGR1-206ENST00000415332 RANBP6O60518 1105 aaKnown RBP18.83■□□□□ 0.6
SYNGR1-206ENST00000415332 TMEM31Q5JXX7 168 aa18.83■□□□□ 0.6
SYNGR1-206ENST00000415332 SYDE2Q5VT97 1194 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms