RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 FOXP2O15409 715 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 EPB41L2O43491 1005 aaKnown RBP10.94□□□□□ -0.66
LINC01888-201ENST00000415138 ORC4O43929 436 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 AOC2O75106 756 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 RASA1P20936 1047 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 USP14P54578 494 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 PABPC4Q13310 644 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC01888-201ENST00000415138 BIRC2Q13490 618 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 SEPT2Q15019 361 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 CCL15Q16663 113 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 FAM47AQ5JRC9 791 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 JAKMIP3Q5VZ66 844 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 GADL1Q6ZQY3 521 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 NCOA7Q8NI08 942 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 CEP89Q96ST8 783 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 AFG3L2Q9Y4W6 797 aa10.94□□□□□ -0.66
LINC01888-201ENST00000415138 FAM155AB1AL88 458 aaPredicted RBP10.93□□□□□ -0.66
LINC01888-201ENST00000415138 SMIM22K7EJ46 135 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 CCP110O43303 1012 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 FDX1P10109 184 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 U2AF2P26368 475 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC01888-201ENST00000415138 ICA1Q05084 483 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 KRT32Q14532 448 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 SART3Q15020 963 aaKnown RBP10.93□□□□□ -0.66
LINC01888-201ENST00000415138 TTC31Q49AM3 519 aaPredicted RBP10.93□□□□□ -0.66
LINC01888-201ENST00000415138 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 MCTP2Q6DN12 878 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 ARMCX6Q7L4S7 300 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 SYMPKQ92797 1274 aaKnown RBP10.93□□□□□ -0.66
LINC01888-201ENST00000415138 UBAC1Q9BSL1 405 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 WDR18Q9BV38 432 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 GOPCQ9HD26 462 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 PTPRFP10586 1907 aa10.93□□□□□ -0.66
LINC01888-201ENST00000415138 E7EWF7 191 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 SLC27A2O14975 620 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 TTLL1O95922 423 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 CYP21A2P08686 494 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 CD151P48509 253 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 BACE1P56817 501 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 TRIM32Q13049 653 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 RRP1BQ14684 758 aaKnown RBP10.92□□□□□ -0.66
LINC01888-201ENST00000415138 NECTIN1Q15223 517 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
LINC01888-201ENST00000415138 CDC37Q16543 378 aaPredicted RBP10.92□□□□□ -0.66
LINC01888-201ENST00000415138 AMHR2Q16671 573 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 MAP9Q49MG5 647 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 CCDC84Q86UT8 332 aaPredicted RBP10.92□□□□□ -0.66
LINC01888-201ENST00000415138 SDR16C5Q8N3Y7 309 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 FAM184AQ8NB25 1140 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 ANKRD20A12PQ8NF67 263 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 CLIP2Q9UDT6 1046 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 SMC3Q9UQE7 1217 aa10.92□□□□□ -0.66
LINC01888-201ENST00000415138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC01888-201ENST00000415138 B4E1Z4 1266 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 FGRP09769 529 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 EEF2P13639 858 aaKnown RBP10.91□□□□□ -0.66
LINC01888-201ENST00000415138 JUNDP17535 347 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 PSMA5P28066 241 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 TM4SF4P48230 202 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 HMGCS2P54868 508 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 MTMR2Q13614 643 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 ZSCAN26Q16670 478 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 CCDC97Q96F63 343 aaPredicted RBP10.91□□□□□ -0.66
LINC01888-201ENST00000415138 BORCS6Q96GS4 357 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 SPTLC3Q9NUV7 552 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.91□□□□□ -0.66
LINC01888-201ENST00000415138 KCNH4Q9UQ05 1017 aa10.91□□□□□ -0.66
LINC01888-201ENST00000415138 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.66
LINC01888-201ENST00000415138 A0A0G2JLL6 359 aaPredicted RBP10.9□□□□□ -0.66
LINC01888-201ENST00000415138 TTC24A2A3L6 582 aaPredicted RBP10.9□□□□□ -0.66
LINC01888-201ENST00000415138 GJA5P36382 358 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 JAG1P78504 1218 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 PRRT2Q7Z6L0 340 aaPredicted RBP10.9□□□□□ -0.66
LINC01888-201ENST00000415138 RETREG3Q86VR2 466 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 FAM177A1Q8N128 213 aaPredicted RBP10.9□□□□□ -0.66
LINC01888-201ENST00000415138 DNAJC5GQ8N7S2 189 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.66
LINC01888-201ENST00000415138 CEP95Q96GE4 821 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 TTC14Q96N46 770 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 ZKSCAN3Q9BRR0 538 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 USP26Q9BXU7 913 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 KAT14Q9H8E8 782 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 TCP11L1Q9NUJ3 509 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 ZSWIM5Q9P217 1185 aa10.9□□□□□ -0.66
LINC01888-201ENST00000415138 NEDD4P46934 1319 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 IFIT3O14879 490 aaKnown RBP10.89□□□□□ -0.67
LINC01888-201ENST00000415138 CA12O43570 354 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 GUCY1A2P33402 732 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms