RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ACAD9Q9H845 621 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 RNF186Q9NXI6 227 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 SAGE1Q9NXZ1 904 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 CHMP5Q9NZZ3 219 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 CTDP1Q9Y5B0 961 aaPredicted RBP15.25■□□□□ 0.03
CNN3-203ENST00000415017 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 LRRC37A2A6NM11 1700 aa15.25■□□□□ 0.03
CNN3-203ENST00000415017 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 H3BQV1 296 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 EDIL3O43854 480 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 ERCC3P19447 782 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 KRT2P35908 639 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 GRM1Q13255 1194 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 NR5A1Q13285 461 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 IFFO2Q5TF58 517 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
CNN3-203ENST00000415017 ZSCAN16Q9H4T2 348 aaPredicted RBP15.24■□□□□ 0.03
CNN3-203ENST00000415017 A1CFQ9NQ94 594 aaKnown RBP15.24■□□□□ 0.03
CNN3-203ENST00000415017 ZSWIM8A7E2V4 1837 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 DNAJC25-GNG10A0A024R161 153 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 F13A1P00488 732 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 CCNA1P78396 465 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 AP3B2Q13367 1082 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
CNN3-203ENST00000415017 USP17L6PQ6QN14 398 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 BRAPQ7Z569 592 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 NOSTRINQ8IVI9 506 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 REXO1Q8N1G1 1221 aaKnown RBP15.23■□□□□ 0.03
CNN3-203ENST00000415017 CYP39A1Q9NYL5 469 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 CPA4Q9UI42 421 aa15.23■□□□□ 0.03
CNN3-203ENST00000415017 RPTORQ8N122 1335 aa15.22■□□□□ 0.03
CNN3-203ENST00000415017 VPS37CA5D8V6 355 aaPredicted RBP15.22■□□□□ 0.03
CNN3-203ENST00000415017 GCOM1H8Y6P7 765 aaPredicted RBP15.22■□□□□ 0.03
CNN3-203ENST00000415017 STRNO43815 780 aa15.22■□□□□ 0.03
CNN3-203ENST00000415017 FOSP01100 380 aaPredicted RBP15.22■□□□□ 0.03
CNN3-203ENST00000415017 POLR2MP0CAP2 368 aa15.22■□□□□ 0.03
CNN3-203ENST00000415017 RPS6P62753 249 aaKnown RBP15.22■□□□□ 0.03
CNN3-203ENST00000415017 PLS1Q14651 629 aa15.22■□□□□ 0.03
CNN3-203ENST00000415017 SAFBQ15424 915 aaKnown RBP eCLIP15.22■□□□□ 0.03
CNN3-203ENST00000415017 CLEC17AQ6ZS10 378 aa15.22■□□□□ 0.03
CNN3-203ENST00000415017 SYTL5Q8TDW5 730 aaPredicted RBP15.22■□□□□ 0.03
CNN3-203ENST00000415017 CASP8AP2Q9UKL3 1982 aa15.22■□□□□ 0.03
CNN3-203ENST00000415017 PFASO15067 1338 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 MAPK4P31152 587 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 TOB1P50616 345 aaPredicted RBP15.21■□□□□ 0.03
CNN3-203ENST00000415017 FOSBP53539 338 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 UBE2SQ16763 222 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 SLC30A10Q6XR72 485 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 RNF207Q6ZRF8 634 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 KRT25Q7Z3Z0 450 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 FAM133AQ8N9E0 248 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 USP6NLQ92738 828 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 EFCC1Q9HA90 598 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 BRMS1Q9HCU9 246 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 TMEM260Q9NX78 707 aa15.21■□□□□ 0.03
CNN3-203ENST00000415017 BIN2Q9UBW5 565 aaPredicted RBP15.21■□□□□ 0.03
CNN3-203ENST00000415017 KIAA1217Q5T5P2 1943 aa15.21■□□□□ 0.02
CNN3-203ENST00000415017 ASTN1O14525 1302 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 FAM205CA6NFA0 338 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 CFBP00751 764 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 IGHA2P01877 340 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 CTGFP29279 349 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
CNN3-203ENST00000415017 SREBF1P36956 1147 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
CNN3-203ENST00000415017 GRB14Q14449 540 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 NCAPG2Q86XI2 1143 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 RASGRP4Q8TDF6 673 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 FGD4Q96M96 766 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 WBP1LQ9NX94 342 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 MCM3APO60318 1980 aa15.2■□□□□ 0.02
CNN3-203ENST00000415017 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 CYP3A4P08684 503 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 PTPREP23469 700 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 TRAPPC10P48553 1259 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
CNN3-203ENST00000415017 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
CNN3-203ENST00000415017 MORN1Q5T089 497 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 MYSM1Q5VVJ2 828 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 GPR142Q7Z601 462 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 JMYQ8N9B5 988 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 MBOAT7Q96N66 472 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 ANO3Q9BYT9 981 aa15.19■□□□□ 0.02
CNN3-203ENST00000415017 MORC2Q9Y6X9 1032 aaPredicted RBP15.19■□□□□ 0.02
CNN3-203ENST00000415017 CYP3A7-CYP3A51PA0A087WV96 503 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 SLC15A5A6NIM6 579 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 TRPA1O75762 1119 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 TBC1D8O95759 1140 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 HOXC6P09630 235 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 FCER1AP12319 257 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 CYP3A7P24462 503 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 EDNRBP24530 442 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 CIITAP33076 1130 aa15.18■□□□□ 0.02
CNN3-203ENST00000415017 USP11P51784 963 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms