RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 PPP1R13LQ8WUF5 828 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 NOD1Q9Y239 953 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
CPNE1-208ENST00000414711 KMT2EQ8IZD2 1858 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 F5H6K3 240 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 CPT1AP50416 773 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 KLRC3Q07444 240 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 TCEAL5Q5H9L2 206 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 NFRKBQ6P4R8 1299 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 CNKSR3Q6P9H4 555 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 AMOTL1Q8IY63 956 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 BANK1Q8NDB2 785 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
CPNE1-208ENST00000414711 ZNF532Q9HCE3 1301 aa18.94■□□□□ 0.62
CPNE1-208ENST00000414711 DUSP28Q4G0W2 176 aa18.93■□□□□ 0.62
CPNE1-208ENST00000414711 C12orf60Q5U649 245 aa18.93■□□□□ 0.62
CPNE1-208ENST00000414711 FAM117BQ6P1L5 589 aa18.93■□□□□ 0.62
CPNE1-208ENST00000414711 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
CPNE1-208ENST00000414711 CCDC155Q8N6L0 562 aa18.93■□□□□ 0.62
CPNE1-208ENST00000414711 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
CPNE1-208ENST00000414711 EAF2Q96CJ1 260 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-208ENST00000414711 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.93■□□□□ 0.62
CPNE1-208ENST00000414711 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-208ENST00000414711 BAZ2AQ9UIF9 1905 aaKnown RBP18.93■□□□□ 0.62
CPNE1-208ENST00000414711 POLA2Q14181 598 aa18.92■□□□□ 0.62
CPNE1-208ENST00000414711 SMAD2Q15796 467 aaKnown RBP18.92■□□□□ 0.62
CPNE1-208ENST00000414711 TRIM67Q6ZTA4 783 aa18.92■□□□□ 0.62
CPNE1-208ENST00000414711 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
CPNE1-208ENST00000414711 ARMT1Q9H993 441 aa18.92■□□□□ 0.62
CPNE1-208ENST00000414711 RNF146Q9NTX7 359 aa18.92■□□□□ 0.62
CPNE1-208ENST00000414711 CLDND1Q9NY35 253 aa18.92■□□□□ 0.62
CPNE1-208ENST00000414711 ABHD14A-ACY1A0A1B0GW23 586 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 PRKAB2O43741 272 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
CPNE1-208ENST00000414711 PTPN11Q06124 597 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-208ENST00000414711 SLFN5Q08AF3 891 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 GPNMBQ14956 572 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 TTF1Q15361 905 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-208ENST00000414711 FBXL6Q8N531 539 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 ATOH1Q92858 354 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-208ENST00000414711 IRF2BPLQ9H1B7 796 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 NSUN3Q9H649 340 aaKnown RBP18.91■□□□□ 0.62
CPNE1-208ENST00000414711 ALG13Q9NP73 1137 aaKnown RBP18.91■□□□□ 0.62
CPNE1-208ENST00000414711 ATP8A2Q9NTI2 1148 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 FEM1BQ9UK73 627 aa18.91■□□□□ 0.62
CPNE1-208ENST00000414711 TCRBV5S4A2TA0A5A2 114 aa18.9■□□□□ 0.62
CPNE1-208ENST00000414711 TCTN1Q2MV58 587 aa18.9■□□□□ 0.62
CPNE1-208ENST00000414711 LRRC8DQ7L1W4 858 aa18.9■□□□□ 0.62
CPNE1-208ENST00000414711 RPAINQ86UA6 219 aa18.9■□□□□ 0.62
CPNE1-208ENST00000414711 FAM9BQ8IZU0 186 aa18.9■□□□□ 0.62
CPNE1-208ENST00000414711 EFCAB14O75071 495 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 CXCL10P02778 98 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 SELPP16109 830 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 CLUL1Q15846 466 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 PTGISQ16647 500 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 OR6J1Q8NGC5 347 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 WDR11Q9BZH6 1224 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 NYAP2Q9P242 653 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 INSL6Q9Y581 213 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 DCHS1Q96JQ0 3298 aa18.89■□□□□ 0.61
CPNE1-208ENST00000414711 RIF1Q5UIP0 2472 aaKnown RBP18.89■□□□□ 0.61
CPNE1-208ENST00000414711 PLXNA3P51805 1871 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 NBNO60934 754 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 MBD4O95243 580 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
CPNE1-208ENST00000414711 LTBRP36941 435 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 EPC2Q52LR7 807 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 BRDTQ58F21 947 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-208ENST00000414711 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 RAD50Q92878 1312 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 MYO15AQ9UKN7 3530 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 TRIP12Q14669 1992 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-208ENST00000414711 CACNA1BQ00975 2339 aa18.88■□□□□ 0.61
CPNE1-208ENST00000414711 FAM186AA6NE01 2351 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 MBTPS2O43462 519 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 VCPP55072 806 aaKnown RBP18.87■□□□□ 0.61
CPNE1-208ENST00000414711 MORC4Q8TE76 937 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 ARHGAP45Q92619 1136 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 SAMD11Q96NU1 681 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 CYP39A1Q9NYL5 469 aa18.87■□□□□ 0.61
CPNE1-208ENST00000414711 LCTP09848 1927 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 H3BNC9 293 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 STXBP3O00186 592 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 NCK2O43639 380 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 KPNA6O60684 536 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 CT47B1P0C2W7 299 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-208ENST00000414711 FDX1P10109 184 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 SMAD4Q13485 552 aaKnown RBP18.86■□□□□ 0.61
CPNE1-208ENST00000414711 GPM6BQ13491 265 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 IKBKEQ14164 716 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 TKFCQ3LXA3 575 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 ASCL5Q7RTU5 278 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 SP7Q8TDD2 431 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-208ENST00000414711 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 CTAGE1Q96RT6 745 aa18.86■□□□□ 0.61
CPNE1-208ENST00000414711 PROB1E7EW31 1015 aa18.85■□□□□ 0.61
CPNE1-208ENST00000414711 BCAR3O75815 825 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms