RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 HSD17B4P51659 736 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 CNTN2Q02246 1040 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 SCRN1Q12765 414 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 STK3Q13188 491 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 DNERQ8NFT8 737 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 FGD4Q96M96 766 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 TINF2Q9BSI4 451 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 ADD3Q9UEY8 706 aaKnown RBP19.02■□□□□ 0.64
LINC00398-201ENST00000414407 NRBP1Q9UHY1 535 aa19.02■□□□□ 0.64
LINC00398-201ENST00000414407 ASB14A6NK59 587 aa19.01■□□□□ 0.63
LINC00398-201ENST00000414407 CDKL5O76039 1030 aa19.01■□□□□ 0.63
LINC00398-201ENST00000414407 AKAP17AQ02040 695 aaKnown RBP19.01■□□□□ 0.63
LINC00398-201ENST00000414407 ME3Q16798 604 aa19.01■□□□□ 0.63
LINC00398-201ENST00000414407 PFKFB3Q16875 520 aaPredicted RBP19.01■□□□□ 0.63
LINC00398-201ENST00000414407 PPP1R18Q6NYC8 613 aa19.01■□□□□ 0.63
LINC00398-201ENST00000414407 SLC30A10Q6XR72 485 aa19.01■□□□□ 0.63
LINC00398-201ENST00000414407 TRIM22Q8IYM9 498 aa19.01■□□□□ 0.63
LINC00398-201ENST00000414407 ZSCAN31Q96LW9 406 aaPredicted RBP19.01■□□□□ 0.63
LINC00398-201ENST00000414407 RPTORQ8N122 1335 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 hCG_1642624A0A1W2PR95 340 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 SOWAHBA6NEL2 793 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 SCG2P13521 617 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 PRKAR2AP13861 404 aaKnown RBP19■□□□□ 0.63
LINC00398-201ENST00000414407 CALML3P27482 149 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 CACNB2Q08289 660 aaPredicted RBP19■□□□□ 0.63
LINC00398-201ENST00000414407 HEATR3Q7Z4Q2 680 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 SYTL5Q8TDW5 730 aaPredicted RBP19■□□□□ 0.63
LINC00398-201ENST00000414407 TBC1D5Q92609 795 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 GTF3C6Q969F1 213 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 BARHL2Q9NY43 387 aa19■□□□□ 0.63
LINC00398-201ENST00000414407 B4DLN1 442 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 GCOM1H8Y6P7 765 aaPredicted RBP18.99■□□□□ 0.63
LINC00398-201ENST00000414407 PIK3CDO00329 1044 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 CFBP00751 764 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 POLR2MP0CAP2 368 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 CYP2C19P33261 490 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 MRPL12P52815 198 aaKnown RBP18.99■□□□□ 0.63
LINC00398-201ENST00000414407 SSRP1Q08945 709 aaKnown RBP18.99■□□□□ 0.63
LINC00398-201ENST00000414407 TRIM32Q13049 653 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 PKN1Q16512 942 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 WWC2Q6AWC2 1192 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 MORC4Q8TE76 937 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 PHKBQ93100 1093 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 MPHOSPH6Q99547 160 aaKnown RBP18.99■□□□□ 0.63
LINC00398-201ENST00000414407 SLC26A6Q9BXS9 759 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 HMX1Q9NP08 348 aaPredicted RBP18.99■□□□□ 0.63
LINC00398-201ENST00000414407 SH2B1Q9NRF2 756 aaPredicted RBP18.99■□□□□ 0.63
LINC00398-201ENST00000414407 PLXNA1Q9UIW2 1896 aa18.99■□□□□ 0.63
LINC00398-201ENST00000414407 LARGE1O95461 756 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 CCL5P13501 91 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 CAPN2P17655 700 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 MCM2P49736 904 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 ALDH5A1P51649 535 aaPredicted RBP18.98■□□□□ 0.63
LINC00398-201ENST00000414407 NOL8Q76FK4 1167 aaKnown RBP18.98■□□□□ 0.63
LINC00398-201ENST00000414407 FAM177A1Q8N128 213 aaPredicted RBP18.98■□□□□ 0.63
LINC00398-201ENST00000414407 GPKOWQ92917 476 aaPredicted RBP eCLIP18.98■□□□□ 0.63
LINC00398-201ENST00000414407 GLT8D2Q9H1C3 349 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 PSTPIP2Q9H939 334 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 CNPY2Q9Y2B0 182 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 ASTN1O14525 1302 aa18.98■□□□□ 0.63
LINC00398-201ENST00000414407 STXBP3O00186 592 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 DEXIO95424 95 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 CYBAP13498 195 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 MTFR1Q15390 333 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 ARMCX2Q7L311 632 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 NSUN6Q8TEA1 469 aaKnown RBP18.97■□□□□ 0.63
LINC00398-201ENST00000414407 CCDC12Q8WUD4 166 aaPredicted RBP18.97■□□□□ 0.63
LINC00398-201ENST00000414407 CUL5Q93034 780 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 TMEM106CQ9BVX2 250 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 RNF208Q9H0X6 261 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 ABHD16BQ9H3Z7 469 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 PAK6Q9NQU5 681 aaPredicted RBP18.97■□□□□ 0.63
LINC00398-201ENST00000414407 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.97■□□□□ 0.63
LINC00398-201ENST00000414407 STK36Q9NRP7 1315 aa18.97■□□□□ 0.63
LINC00398-201ENST00000414407 CENPFP49454 3210 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 RBBP6Q7Z6E9 1792 aaKnown RBP18.96■□□□□ 0.63
LINC00398-201ENST00000414407 ESYT2A0FGR8 921 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 SNAI1O95863 264 aaPredicted RBP18.96■□□□□ 0.63
LINC00398-201ENST00000414407 GJB1P08034 283 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 EDNRBP24530 442 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 NAPAP54920 295 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 NECAB1Q8N987 351 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 PURBQ96QR8 312 aaKnown RBP18.96■□□□□ 0.63
LINC00398-201ENST00000414407 TAAR1Q96RJ0 339 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 IWS1Q96ST2 819 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 RMDN3Q96TC7 470 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.96■□□□□ 0.63
LINC00398-201ENST00000414407 SH3GLB2Q9NR46 395 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 COL20A1Q9P218 1284 aa18.96■□□□□ 0.63
LINC00398-201ENST00000414407 MEIS2O14770 477 aa18.95■□□□□ 0.62
LINC00398-201ENST00000414407 CTDNEP1O95476 244 aa18.95■□□□□ 0.62
LINC00398-201ENST00000414407 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
LINC00398-201ENST00000414407 TYW1BQ6NUM6 668 aa18.95■□□□□ 0.62
LINC00398-201ENST00000414407 SMARCC2Q8TAQ2 1214 aa18.95■□□□□ 0.62
LINC00398-201ENST00000414407 RIC8AQ9NPQ8 531 aa18.95■□□□□ 0.62
LINC00398-201ENST00000414407 LCTP09848 1927 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 SEPT4O43236 478 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 MSCO60682 206 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms