RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 PTK7Q13308 1070 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 ALX1Q15699 326 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 DBN1Q16643 649 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 ABCB5Q2M3G0 1257 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
HCG27-202ENST00000414008 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 GPR161Q8N6U8 529 aaKnown RBP11.43□□□□□ -0.58
HCG27-202ENST00000414008 ZNF280CQ8ND82 737 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 RUFY2Q8WXA3 655 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 CCDC17Q96LX7 622 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 PTPN18Q99952 460 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 AS3MTQ9HBK9 375 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 SAGE1Q9NXZ1 904 aa11.43□□□□□ -0.58
HCG27-202ENST00000414008 SIPA1L1O43166 1804 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 TRIM75PA6NK02 468 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
HCG27-202ENST00000414008 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
HCG27-202ENST00000414008 FGAP02671 866 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
HCG27-202ENST00000414008 MSX1P28360 303 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 PPARAQ07869 468 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 RAB3GAP1Q15042 981 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 CRTC2Q53ET0 693 aaPredicted RBP11.42□□□□□ -0.58
HCG27-202ENST00000414008 BMP2KLQ5H9B9 411 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 FASTKD5Q7L8L6 764 aaKnown RBP11.42□□□□□ -0.58
HCG27-202ENST00000414008 STK11IPQ8N1F8 1099 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 C1orf216Q8TAB5 229 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
HCG27-202ENST00000414008 WDR18Q9BV38 432 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 NUCKS1Q9H1E3 243 aaKnown RBP11.42□□□□□ -0.58
HCG27-202ENST00000414008 MKNK2Q9HBH9 465 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
HCG27-202ENST00000414008 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
HCG27-202ENST00000414008 SFI1A8K8P3 1242 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 BTBD19C9JJ37 291 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 TBC1D8O95759 1140 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 HSPA8P11142 646 aaKnown RBP11.41□□□□□ -0.58
HCG27-202ENST00000414008 LBX1P52954 281 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 EPHA4P54764 986 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
HCG27-202ENST00000414008 ZNF444Q8N0Y2 327 aaPredicted RBP11.41□□□□□ -0.58
HCG27-202ENST00000414008 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
HCG27-202ENST00000414008 DDX60LQ5H9U9 1706 aaKnown RBP11.4□□□□□ -0.58
HCG27-202ENST00000414008 RAD50Q92878 1312 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 C19orf81C9J6K1 198 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 AKR1B1P15121 316 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 BACE1P56817 501 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 PDE4BQ07343 736 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 MOGSQ13724 837 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 LBRQ14739 615 aaKnown RBP11.4□□□□□ -0.58
HCG27-202ENST00000414008 SEPT2Q15019 361 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 GADL1Q6ZQY3 521 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 ANKRD23Q86SG2 305 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 ANKMY2Q8IV38 441 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 SLC9A9Q8IVB4 645 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 TSEN2Q8NCE0 465 aaKnown RBP11.4□□□□□ -0.58
HCG27-202ENST00000414008 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 CFHR5Q9BXR6 569 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 COL25A1Q9BXS0 654 aaPredicted RBP11.4□□□□□ -0.58
HCG27-202ENST00000414008 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
HCG27-202ENST00000414008 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 USP3Q9Y6I4 520 aa11.4□□□□□ -0.58
HCG27-202ENST00000414008 BAZ2AQ9UIF9 1905 aaKnown RBP11.4□□□□□ -0.58
HCG27-202ENST00000414008 ZMYM6O95789 1325 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 PDHXO00330 501 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 DKK1O94907 266 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 HMGCS2P54868 508 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 FOXK2Q01167 660 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 DPYDQ12882 1025 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 DOCK1Q14185 1865 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 TAF1CQ15572 869 aaPredicted RBP11.39□□□□□ -0.59
HCG27-202ENST00000414008 EFHC2Q5JST6 749 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 GPAT2Q6NUI2 795 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 IL25Q9H293 177 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 ZFYVE28Q9HCC9 887 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 TMOD4Q9NZQ9 345 aa11.39□□□□□ -0.59
HCG27-202ENST00000414008 ZNF213O14771 459 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 SGSM2O43147 1006 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 PRDM1O75626 825 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 CRHR2Q13324 411 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 GTPBP3Q969Y2 492 aaKnown RBP11.38□□□□□ -0.59
HCG27-202ENST00000414008 FEZ1Q99689 392 aa11.38□□□□□ -0.59
HCG27-202ENST00000414008 KIAA1683Q9H0B3 1180 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms