RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 SLC43A3Q8NBI5 491 aa19.57■□□□□ 0.72
SF1-207ENST00000413951 MAFAQ8NHW3 353 aaPredicted RBP19.57■□□□□ 0.72
SF1-207ENST00000413951 DSCC1Q9BVC3 393 aa19.57■□□□□ 0.72
SF1-207ENST00000413951 WDR19Q8NEZ3 1342 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 LAMA4Q16363 1823 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 PTPDC1A2A3K4 754 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 ZNF213O14771 459 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 CD4P01730 458 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 PDHBP11177 359 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 SLC16A2P36021 539 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 CPT1AP50416 773 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 SNAP25P60880 206 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 DUSP28Q4G0W2 176 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 TAPT1Q6NXT6 567 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 DGKHQ86XP1 1220 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 FBXO16Q8IX29 292 aaPredicted RBP19.56■□□□□ 0.72
SF1-207ENST00000413951 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.56■□□□□ 0.72
SF1-207ENST00000413951 TTYH1Q9H313 450 aaPredicted RBP19.56■□□□□ 0.72
SF1-207ENST00000413951 GPCPD1Q9NPB8 672 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 POLR3EQ9NVU0 708 aa19.56■□□□□ 0.72
SF1-207ENST00000413951 FRMPD2Q68DX3 1309 aaPredicted RBP19.55■□□□□ 0.72
SF1-207ENST00000413951 NKRFO15226 690 aaKnown RBP eCLIP19.55■□□□□ 0.722e-6■■■□□ 17.1
SF1-207ENST00000413951 SUPT20HL2P0C7V6 817 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 DNAJB2P25686 324 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 ALDH5A1P51649 535 aaPredicted RBP19.55■□□□□ 0.72
SF1-207ENST00000413951 ZNF543Q08ER8 600 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 TTBK2Q6IQ55 1244 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 RNF207Q6ZRF8 634 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 EEPD1Q7L9B9 569 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 DNERQ8NFT8 737 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 TIFAQ96CG3 184 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 HIPK3Q9H422 1215 aa19.55■□□□□ 0.72
SF1-207ENST00000413951 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
SF1-207ENST00000413951 CSF2RAP15509 400 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 HAND2P61296 217 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
SF1-207ENST00000413951 TMEM240Q5SV17 173 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 CASC1Q6TDU7 716 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 RPUSD2Q8IZ73 545 aaKnown RBP19.54■□□□□ 0.72
SF1-207ENST00000413951 WDR11Q9BZH6 1224 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 PPP1R12CQ9BZL4 782 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 IL23AQ9NPF7 189 aa19.54■□□□□ 0.72
SF1-207ENST00000413951 ASTN1O14525 1302 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 KPNA6O60684 536 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 SNHG28P0DPA3 235 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 PDE4DQ08499 809 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 RGS22Q8NE09 1264 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 MYLIPQ8WY64 445 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 PDGFCQ9NRA1 345 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 CTNNA3Q9UI47 895 aa19.53■□□□□ 0.72
SF1-207ENST00000413951 RBM47A0AV96 593 aaKnown RBP19.52■□□□□ 0.72
SF1-207ENST00000413951 NFIBO00712 420 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 FGBP02675 491 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 CALML3P27482 149 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 RAB30Q15771 203 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 ZNF365Q70YC5 407 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 SCFD2Q8WU76 684 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 LSG1Q9H089 658 aaKnown RBP19.52■□□□□ 0.72
SF1-207ENST00000413951 ZNF576Q9H609 170 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 MSRAQ9UJ68 235 aa19.52■□□□□ 0.72
SF1-207ENST00000413951 MCM3APO60318 1980 aa19.52■□□□□ 0.71
SF1-207ENST00000413951 PFKMP08237 780 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 PTH1RQ03431 593 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 PPP2R5BQ15173 497 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 RASGRP2Q7LDG7 609 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 HERVK_113Q902F9 699 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 MAP4K1Q92918 833 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 KAT14Q9H8E8 782 aa19.51■□□□□ 0.71
SF1-207ENST00000413951 CYP2C18P33260 490 aa19.5■□□□□ 0.71
SF1-207ENST00000413951 RPS6P62753 249 aaKnown RBP19.5■□□□□ 0.71
SF1-207ENST00000413951 IMMTQ16891 758 aaKnown RBP19.5■□□□□ 0.71
SF1-207ENST00000413951 C16orf59Q7L2K0 433 aa19.5■□□□□ 0.71
SF1-207ENST00000413951 MCF2L2Q86YR7 1114 aa19.5■□□□□ 0.71
SF1-207ENST00000413951 OR6J1Q8NGC5 347 aa19.5■□□□□ 0.71
SF1-207ENST00000413951 CLEC4DQ8WXI8 215 aa19.5■□□□□ 0.71
SF1-207ENST00000413951 SYMPKQ92797 1274 aaKnown RBP19.5■□□□□ 0.71
SF1-207ENST00000413951 GAS2L1Q99501 681 aaPredicted RBP19.5■□□□□ 0.71
SF1-207ENST00000413951 MTG1Q9BT17 334 aaPredicted RBP19.5■□□□□ 0.71
SF1-207ENST00000413951 CNNM2Q9H8M5 875 aa19.5■□□□□ 0.71
SF1-207ENST00000413951 LAMA2P24043 3122 aaKnown RBP19.49■□□□□ 0.71
SF1-207ENST00000413951 ACRP10323 421 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 ASPRV1Q53RT3 343 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 TBC1D10CQ8IV04 446 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 PNMA1Q8ND90 353 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 ANKS1AQ92625 1134 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 COL25A1Q9BXS0 654 aaPredicted RBP19.49■□□□□ 0.71
SF1-207ENST00000413951 KRT23Q9C075 422 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 ALDH8A1Q9H2A2 487 aaPredicted RBP19.49■□□□□ 0.71
SF1-207ENST00000413951 ABCB11O95342 1321 aa19.49■□□□□ 0.71
SF1-207ENST00000413951 B4GALT4O60513 344 aa19.48■□□□□ 0.71
SF1-207ENST00000413951 EDNRBP24530 442 aa19.48■□□□□ 0.71
SF1-207ENST00000413951 PTPN11Q06124 597 aaPredicted RBP19.48■□□□□ 0.71
SF1-207ENST00000413951 TTLL4Q14679 1199 aa19.48■□□□□ 0.71
SF1-207ENST00000413951 GRIN2CQ14957 1233 aa19.48■□□□□ 0.71
SF1-207ENST00000413951 SLC30A10Q6XR72 485 aa19.48■□□□□ 0.71
SF1-207ENST00000413951 PURBQ96QR8 312 aaKnown RBP19.48■□□□□ 0.71
SF1-207ENST00000413951 NOC4LQ9BVI4 516 aaKnown RBP19.48■□□□□ 0.71
SF1-207ENST00000413951 PBX4Q9BYU1 374 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms