RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PIGSQ96S52 555 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 AMNQ9BXJ7 453 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 PDGFCQ9NRA1 345 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 ZMYND8Q9ULU4 1186 aaPredicted RBP17.22■□□□□ 0.35
LIMS4-201ENST00000413601 MRPL11Q9Y3B7 192 aaKnown RBP17.22■□□□□ 0.35
LIMS4-201ENST00000413601 DDAH1O94760 285 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 LIFRP42702 1097 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 TNFAIP2Q03169 654 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
LIMS4-201ENST00000413601 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
LIMS4-201ENST00000413601 TCEANC2Q96MN5 208 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 MAP3K14Q99558 947 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 PHF24Q9UPV7 400 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 COLQQ9Y215 455 aaPredicted RBP17.21■□□□□ 0.35
LIMS4-201ENST00000413601 PCDHA1Q9Y5I3 950 aa17.21■□□□□ 0.35
LIMS4-201ENST00000413601 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 C6orf222P0C671 652 aaPredicted RBP17.2■□□□□ 0.34
LIMS4-201ENST00000413601 SYN1P17600 705 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 RXRAP19793 462 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
LIMS4-201ENST00000413601 TAPT1Q6NXT6 567 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 SLC39A5Q6ZMH5 540 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 RAB11FIP4Q86YS3 637 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 KLHDC9Q8NEP7 349 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 VTA1Q9NP79 307 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 COL20A1Q9P218 1284 aa17.2■□□□□ 0.34
LIMS4-201ENST00000413601 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 LOC102724159A0A0B4J2E5 919 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 OPLAHO14841 1288 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 REC8O95072 547 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 CFBP00751 764 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 SMPD1P17405 629 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 PTGS1P23219 599 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 KIF5BP33176 963 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 RTP1P59025 263 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 PDE4DQ08499 809 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 KRT32Q14532 448 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 PWP2Q15269 919 aaKnown RBP17.19■□□□□ 0.34
LIMS4-201ENST00000413601 KCNA10Q16322 511 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 TMEM63BQ5T3F8 832 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 IQSEC1Q6DN90 963 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 CHRDL2Q6WN34 429 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
LIMS4-201ENST00000413601 SYTL5Q8TDW5 730 aaPredicted RBP17.19■□□□□ 0.34
LIMS4-201ENST00000413601 KCNB2Q92953 911 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 TAAR1Q96RJ0 339 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
LIMS4-201ENST00000413601 UPF3AQ9H1J1 476 aaKnown RBP17.19■□□□□ 0.34
LIMS4-201ENST00000413601 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 PCDH10Q9P2E7 1040 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
LIMS4-201ENST00000413601 DNAH12Q6ZR08 3092 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-201ENST00000413601 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 CALM1P0DP23 149 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 CALM2P0DP24 149 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 CALM3P0DP25 149 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 HSPA4P34932 840 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 ACLYP53396 1101 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 GJA9P57773 515 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 GNASQ5JWF2 1037 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 CCSAPQ6IQ19 270 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-201ENST00000413601 SGMS1Q86VZ5 419 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
LIMS4-201ENST00000413601 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
LIMS4-201ENST00000413601 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 MAF1Q9H063 256 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 SPC25Q9HBM1 224 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
LIMS4-201ENST00000413601 ATP11BQ9Y2G3 1177 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
LIMS4-201ENST00000413601 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 CTAGE5O15320 804 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 CPA1P15085 419 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 EDNRBP24530 442 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
LIMS4-201ENST00000413601 BEX3Q00994 111 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 HABP4Q5JVS0 413 aaKnown RBP17.17■□□□□ 0.34
LIMS4-201ENST00000413601 TLK2Q86UE8 772 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
LIMS4-201ENST00000413601 FANCBQ8NB91 859 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 NSUN6Q8TEA1 469 aaKnown RBP17.17■□□□□ 0.34
LIMS4-201ENST00000413601 RMDN3Q96TC7 470 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 LZTS2Q9BRK4 669 aa17.17■□□□□ 0.34
LIMS4-201ENST00000413601 MOXD2PA6NHM9 499 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 B4DLN1 442 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 DYNC1LI2O43237 492 aaPredicted RBP17.16■□□□□ 0.34
LIMS4-201ENST00000413601 ASGR1P07306 291 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
LIMS4-201ENST00000413601 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 GNAQP50148 359 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 HSD17B4P51659 736 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
LIMS4-201ENST00000413601 TRAF1Q13077 416 aa17.16■□□□□ 0.34
LIMS4-201ENST00000413601 SNX17Q15036 470 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms