RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 PCDHA1Q9Y5I3 950 aa11.69□□□□□ -0.54
TMEM248-202ENST00000413593 LOC102724159A0A0B4J2E5 919 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 OPLAHO14841 1288 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 RARBP10826 455 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 COL6A1P12109 1028 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 CASTP20810 708 aaKnown RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 RPS6KB1P23443 525 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 ALDH5A1P51649 535 aaPredicted RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 TRAF1Q13077 416 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 PWP2Q15269 919 aaKnown RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 Q6ZUG5 572 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 TMTC3Q6ZXV5 915 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 SRBD1Q8N5C6 995 aaKnown RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 SYTL5Q8TDW5 730 aaPredicted RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 LENG1Q96BZ8 264 aaPredicted RBP11.68□□□□□ -0.54
TMEM248-202ENST00000413593 HTATIP2Q9BUP3 242 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
TMEM248-202ENST00000413593 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 DNM1LO00429 736 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 ZBTB43O43298 467 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 ADCY6O43306 1168 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 EDNRBP24530 442 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 RCAN1P53805 252 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 FGD1P98174 961 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 GHRHRQ02643 423 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 FBXL16Q8N461 479 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 ARRDC4Q8NCT1 418 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 DNERQ8NFT8 737 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 PIBF1Q8WXW3 757 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 BRF1Q92994 677 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 RRP36Q96EU6 259 aaKnown RBP11.67□□□□□ -0.54
TMEM248-202ENST00000413593 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 C11orf49Q9H6J7 331 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 XPNPEP3Q9NQH7 507 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
TMEM248-202ENST00000413593 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 PGK1P00558 417 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 CFBP00751 764 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 HSD17B4P51659 736 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 APOBRQ0VD83 1088 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 LRRC41Q15345 812 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 RTN1Q16799 776 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 GJC2Q5T442 439 aaPredicted RBP11.66□□□□□ -0.54
TMEM248-202ENST00000413593 RUFY3Q7L099 469 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
TMEM248-202ENST00000413593 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 TM6SF1Q9BZW5 370 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 VTA1Q9NP79 307 aa11.66□□□□□ -0.54
TMEM248-202ENST00000413593 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
TMEM248-202ENST00000413593 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
TMEM248-202ENST00000413593 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 SYNRGQ9UMZ2 1314 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 ZNFX1Q9P2E3 1918 aaKnown RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 ADAMTS4O75173 837 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 DUSP11O75319 330 aaKnown RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 ADCYAP1R1P41586 468 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 PDE4DQ08499 809 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 FUT2Q10981 343 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 CCDC82Q8N4S0 544 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 SAMD3Q8N6K7 520 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 DPF3Q92784 378 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 RMDN3Q96TC7 470 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 MPHOSPH6Q99547 160 aaKnown RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 FAM217BQ9NTX9 383 aaPredicted RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 MAP3K20Q9NYL2 800 aaKnown RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
TMEM248-202ENST00000413593 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
TMEM248-202ENST00000413593 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 CNTNAP5Q8WYK1 1306 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 SMCHD1A6NHR9 2005 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 PLXNA1Q9UIW2 1896 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 hCG_1642624A0A1W2PR95 340 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 B4DLN1 442 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 GCOM1H8Y6P7 765 aaPredicted RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 EIF5BO60841 1220 aaKnown RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 POLR2MP0CAP2 368 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 SMPD1P17405 629 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 CDC27P30260 824 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 METAP2P50579 478 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 MRPL12P52815 198 aaKnown RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 EVCP57679 992 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 ANAPC15P60006 121 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 TNFAIP2Q03169 654 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms