RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GPAA1O43292 621 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 SUPT20HL2P0C7V6 817 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 ALAS1P13196 640 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 TDO2P48775 406 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
RFFL-203ENST00000413582 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 MUM1L1Q5H9M0 696 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 SPRED2Q7Z698 418 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 FAM160B2Q86V87 743 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 ZNF444Q8N0Y2 327 aaPredicted RBP11.37□□□□□ -0.59
RFFL-203ENST00000413582 NEDD1Q8NHV4 660 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 PHOSPHO2Q8TCD6 241 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 ARNTL2Q8WYA1 636 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 APPBP2Q92624 585 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 HLA-CQ95604 372 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 ZNF287Q9HBT7 754 aa11.37□□□□□ -0.59
RFFL-203ENST00000413582 ISY1Q9ULR0 285 aaKnown RBP11.37□□□□□ -0.59
RFFL-203ENST00000413582 LPXNO60711 386 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 PLA2G6O60733 806 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 GPR37L1O60883 481 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 ACTN1P12814 892 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 RFC2P35250 354 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 SLC1A4P43007 532 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 IKQ13123 557 aaPredicted RBP11.36□□□□□ -0.59
RFFL-203ENST00000413582 GRB10Q13322 594 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 KBTBD3Q8NAB2 608 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 STAG1Q8WVM7 1258 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
RFFL-203ENST00000413582 ZBTB40Q9NUA8 1239 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 POLR3EQ9NVU0 708 aa11.36□□□□□ -0.59
RFFL-203ENST00000413582 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 M0R2C6 588 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 TSPY3P0CV98 308 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 TSPY8P0CW00 308 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 SNAP25P60880 206 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 NSMFQ6X4W1 530 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 CHMP4CQ96CF2 233 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 SIP14410 1827 aa11.35□□□□□ -0.59
RFFL-203ENST00000413582 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
RFFL-203ENST00000413582 MYL3P08590 195 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 GNAT2P19087 354 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 MCCP23508 829 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 CPT1AP50416 773 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 ALDH5A1P51649 535 aaPredicted RBP11.34□□□□□ -0.59
RFFL-203ENST00000413582 NBPF20Q3BBV1 942 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 FAM47CQ5HY64 1035 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 NFRKBQ6P4R8 1299 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 GDPD5Q8WTR4 605 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 MTG1Q9BT17 334 aaPredicted RBP11.34□□□□□ -0.59
RFFL-203ENST00000413582 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 ECHDC1Q9NTX5 307 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 PRR12Q9ULL5 1215 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
RFFL-203ENST00000413582 LOC102724159A0A0B4J2E5 919 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 LCHNA4D1U4 455 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
RFFL-203ENST00000413582 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
RFFL-203ENST00000413582 BAIAP3O94812 1187 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 ICAM1P05362 532 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 TFAP4Q01664 338 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 PDE4BQ07343 736 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 PWP2Q15269 919 aaKnown RBP11.33□□□□□ -0.6
RFFL-203ENST00000413582 IFNL3Q8IZI9 196 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
RFFL-203ENST00000413582 FTOQ9C0B1 505 aaKnown RBP eCLIP11.33□□□□□ -0.6
RFFL-203ENST00000413582 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
RFFL-203ENST00000413582 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 KIF28PB7ZC32 967 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 NFIBO00712 420 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 APPP05067 770 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
RFFL-203ENST00000413582 WDR5P61964 334 aaKnown RBP11.32□□□□□ -0.6
RFFL-203ENST00000413582 PPARAQ07869 468 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
RFFL-203ENST00000413582 PPP2R5BQ15173 497 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 TSHZ3Q63HK5 1081 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 SLC30A10Q6XR72 485 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 RANBP17Q9H2T7 1088 aaKnown RBP11.32□□□□□ -0.6
RFFL-203ENST00000413582 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
RFFL-203ENST00000413582 ADD3Q9UEY8 706 aaKnown RBP11.32□□□□□ -0.6
RFFL-203ENST00000413582 STX8Q9UNK0 236 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFFL-203ENST00000413582 RAD50Q92878 1312 aa11.32□□□□□ -0.6
RFFL-203ENST00000413582 A6NJR5 290 aa11.31□□□□□ -0.6
RFFL-203ENST00000413582 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
RFFL-203ENST00000413582 NMT2O60551 498 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms