RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 IQSEC1Q6DN90 963 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 CCSAPQ6IQ19 270 aaPredicted RBP11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 CASC1Q6TDU7 716 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 PIGSQ96S52 555 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 PNMA2Q9UL42 364 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 ABCB11O95342 1321 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 TRIM43BA6NCK2 446 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 PPP1R11O60927 126 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 SLC34A2O95436 690 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 CFBP00751 764 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 RXRAP19793 462 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 MCM5P33992 734 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 TROAPQ12815 778 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 TLK2Q86UE8 772 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 SYTL5Q8TDW5 730 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 TRIM43Q96BQ3 446 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 LBHD1Q9BQE6 289 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 AMNQ9BXJ7 453 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 COL20A1Q9P218 1284 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 PCDHA1Q9Y5I3 950 aa11.84□□□□□ -0.51
NCKIPSD-202ENST00000413374 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 CCDC69A6NI79 296 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 SH2B2O14492 632 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 ZBTB5O15062 677 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 CTAGE5O15320 804 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 CYTH3O43739 400 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 MORC4Q8TE76 937 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 COPS5Q92905 334 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 BADQ92934 168 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 GLT1D1Q96MS3 346 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 UPF3AQ9H1J1 476 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 VTA1Q9NP79 307 aa11.83□□□□□ -0.52
NCKIPSD-202ENST00000413374 SOX1O00570 391 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 EIF2AK2P19525 551 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 HOXA13P31271 388 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 BMP8BP34820 402 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 SNX17Q15036 470 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 FSCN1Q16658 493 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 ARHGEF16Q5VV41 709 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 SEPT14Q6ZU15 432 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 ZNF654Q8IZM8 581 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 DNERQ8NFT8 737 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 CTCFLQ8NI51 663 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 PPP1R13LQ8WUF5 828 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 MTMR8Q96EF0 704 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 NEK1Q96PY6 1258 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 RIOX1Q9H6W3 641 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 PDLIM7Q9NR12 457 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 TMEM39AQ9NV64 488 aa11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 ZNFX1Q9P2E3 1918 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-202ENST00000413374 PNMA6FA0A0J9YX94 578 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 hCG_1642624A0A1W2PR95 340 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 DCDC2CA8MYV0 355 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 OPLAHO14841 1288 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 PLEKHA8P1O95397 391 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 CLTBP09497 229 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 TXNP10599 105 aaKnown RBP11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 MYCLP12524 364 aaPredicted RBP11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 CPA1P15085 419 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 ITGB8P26012 769 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 CST5P28325 142 aaPredicted RBP11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 PSMC6P62333 389 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 ADCK5Q3MIX3 580 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 DUSP28Q4G0W2 176 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 C1orf53Q5VUE5 145 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 OR6J1Q8NGC5 347 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 LRCH3Q96II8 777 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 RMDN3Q96TC7 470 aa11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
NCKIPSD-202ENST00000413374 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 B4DLN1 442 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 ARVCFO00192 962 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 ZEB2O60315 1214 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 SORBS3O60504 671 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 MYL3P08590 195 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 EDNRBP24530 442 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 FAAP100Q0VG06 881 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms