RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
RBM39-207ENST00000412738 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
RBM39-207ENST00000412738 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
RBM39-207ENST00000412738 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
RBM39-207ENST00000412738 ASTN1O14525 1302 aa16.07■□□□□ 0.16
RBM39-207ENST00000412738 ABCB11O95342 1321 aa16.07■□□□□ 0.16
RBM39-207ENST00000412738 SGSM2O43147 1006 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
RBM39-207ENST00000412738 BEX3Q00994 111 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 PDE4DQ08499 809 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
RBM39-207ENST00000412738 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 Q9Y3F1 56 aa16.06■□□□□ 0.16
RBM39-207ENST00000412738 ARVCFO00192 962 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
RBM39-207ENST00000412738 TLR3O15455 904 aaKnown RBP16.05■□□□□ 0.16
RBM39-207ENST00000412738 CABYRO75952 493 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 MRPL11Q9Y3B7 192 aaKnown RBP16.05■□□□□ 0.16
RBM39-207ENST00000412738 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
RBM39-207ENST00000412738 E7EWF7 191 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 KIAA0355O15063 1070 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 NKX3-2P78367 333 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 FAAP100Q0VG06 881 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 WTAPQ15007 396 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 SEC23AQ15436 765 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 DUSP28Q4G0W2 176 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
RBM39-207ENST00000412738 MAF1Q9H063 256 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
RBM39-207ENST00000412738 LAMA2P24043 3122 aaKnown RBP16.03■□□□□ 0.16
RBM39-207ENST00000412738 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 CTAGE5O15320 804 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 DEFB123Q8N688 67 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 MAP4K1Q92918 833 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 AMNQ9BXJ7 453 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 LCTP09848 1927 aa16.03■□□□□ 0.16
RBM39-207ENST00000412738 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.16
RBM39-207ENST00000412738 ITGB8P26012 769 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 CPT1AP50416 773 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 CDK7P50613 346 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 FPGSQ05932 587 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 SHHQ15465 462 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.16
RBM39-207ENST00000412738 CHST3Q7LGC8 479 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 STAG2Q8N3U4 1231 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 NSUN6Q8TEA1 469 aaKnown RBP16.02■□□□□ 0.16
RBM39-207ENST00000412738 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
RBM39-207ENST00000412738 MAD2L2Q9UI95 211 aa16.02■□□□□ 0.16
RBM39-207ENST00000412738 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.16
RBM39-207ENST00000412738 TIMP1P01033 207 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 TRAF1Q13077 416 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 ITGA7Q13683 1181 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 CASC1Q6TDU7 716 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 POLR3EQ9NVU0 708 aa16.01■□□□□ 0.15
RBM39-207ENST00000412738 MYH6P13533 1939 aa16■□□□□ 0.15
RBM39-207ENST00000412738 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
RBM39-207ENST00000412738 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
RBM39-207ENST00000412738 ZBTB5O15062 677 aa16■□□□□ 0.15
RBM39-207ENST00000412738 CFBP00751 764 aa16■□□□□ 0.15
RBM39-207ENST00000412738 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
RBM39-207ENST00000412738 PTGS1P23219 599 aa16■□□□□ 0.15
RBM39-207ENST00000412738 EDNRBP24530 442 aa16■□□□□ 0.15
RBM39-207ENST00000412738 GRM4Q14833 912 aa16■□□□□ 0.15
RBM39-207ENST00000412738 FAM126BQ8IXS8 530 aa16■□□□□ 0.15
RBM39-207ENST00000412738 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
RBM39-207ENST00000412738 TBC1D5Q92609 795 aa16■□□□□ 0.15
RBM39-207ENST00000412738 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
RBM39-207ENST00000412738 TAAR1Q96RJ0 339 aa16■□□□□ 0.15
RBM39-207ENST00000412738 RMDN3Q96TC7 470 aa16■□□□□ 0.15
RBM39-207ENST00000412738 MYL3P08590 195 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 STXBP2Q15833 593 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 MFSD5Q6N075 450 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 STOX1Q6ZVD7 989 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 Q7L0L9 218 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 IWS1Q96ST2 819 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 PPP1R12CQ9BZL4 782 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
RBM39-207ENST00000412738 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms