RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ERVK-21P61565 698 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 NMIQ13287 307 aaPredicted RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 HSCBQ8IWL3 235 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CNTNAP3BQ96NU0 1288 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 TGS1Q96RS0 853 aaKnown RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 TRMT13Q9NUP7 481 aaKnown RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 PAG1Q9NWQ8 432 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ASTN1O14525 1302 aa11.24□□□□□ -0.61
SOX9-AS1-201ENST00000412640 KMT2EQ8IZD2 1858 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 MPHOSPH10O00566 681 aaKnown RBP11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 SHMT1P34896 483 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 STAT3P40763 770 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CLUL1Q15846 466 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 KIAA1211Q6ZU35 1233 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 FAM227BQ96M60 508 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ZFHX4Q86UP3 3567 aa11.23□□□□□ -0.61
SOX9-AS1-201ENST00000412640 A0A0D9SFI3 127 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CABYRO75952 493 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 COL11A1P12107 1806 aaPredicted RBP11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 AVPR2P30518 371 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 KCNJ6P48051 423 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 PTPRSQ13332 1948 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 LRRFIP1Q32MZ4 808 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CCDC171Q6TFL3 1326 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 PABPC5Q96DU9 382 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 DNAJC2Q99543 621 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
SOX9-AS1-201ENST00000412640 FOCADQ5VW36 1801 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 EPG5Q9HCE0 2579 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 RBAK-RBAKDNI3L0D1 243 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 GOLIM4O00461 696 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 MCAMP43121 646 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 NKX3-2P78367 333 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 DEFB103AP81534 67 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 TNFAIP2Q03169 654 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 PTH1RQ03431 593 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 NECTIN1Q15223 517 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ZMYM1Q5SVZ6 1142 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 POP1Q99575 1024 aaKnown RBP11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 C17orf80Q9BSJ5 609 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 CLDND1Q9NY35 253 aa11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.61
SOX9-AS1-201ENST00000412640 TNKSO95271 1327 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 RNF113AO15541 343 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 KDM4AO75164 1064 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 CD2BP2O95400 341 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 IQCF3P0C7M6 154 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 RFC2P35250 354 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 DDIT3P35638 169 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 USP5P45974 858 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 MCM2P49736 904 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 PLCD1P51178 756 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 WDR5P61964 334 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 ZXDAP98168 799 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 TTF1Q15361 905 aaPredicted RBP11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 SMAD2Q15796 467 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 TSGA10IPQ3SY00 556 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 FAM117BQ6P1L5 589 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 ARMCX2Q7L311 632 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 TLK2Q86UE8 772 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 CLEC10AQ8IUN9 316 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 PPP1R13LQ8WUF5 828 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 TM6SF1Q9BZW5 370 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 EHD4Q9H223 541 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 ADAMTS5Q9UNA0 930 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 BAHCC1Q9P281 2608 aa11.2□□□□□ -0.62
SOX9-AS1-201ENST00000412640 MYH1P12882 1939 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms